Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145011 SustainPine v3.0 472
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene145028 SustainPine v3.0 305
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 6.0e-25
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.021e-15
Internal
sp_v3.0_unigene145118 SustainPine v3.0 434
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] 5.99994e-41
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.921e-20
Putative N-terminus
sp_v3.0_unigene145218 SustainPine v3.0 270
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein 1.852e-08
Internal
sp_v3.0_unigene145221 SustainPine v3.0 416
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-34
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene146491 SustainPine v3.0 504
• AutoFact: Reverse transcriptase (Fragment) n=9 Tax=Eleocharis RepID=D5LVJ1_9POAL 1.0e-08
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Reverse transcriptase 4.211e-07
Internal
sp_v3.0_unigene147859 SustainPine v3.0 349
• AutoFact: H0512B01.1 protein n=2 Tax=Oryza sativa RepID=Q25AF3_ORYSA 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene147960 SustainPine v3.0 455
• AutoFact: polyprotein [Primula vulgaris] 2.0e-35
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.852e-17
C-terminus
sp_v3.0_unigene148060 SustainPine v3.0 536
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 1.631e-06
Complete
sp_v3.0_unigene148084 SustainPine v3.0 166
• AutoFact: Polyprotein, 3'-partial, putative (Fragment) n=1 Tax=Solanum demissum RepID=Q0KIP3_SOLDE 3.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.78995e-41
Putative N-terminus
sp_v3.0_unigene148152 SustainPine v3.0 275
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.602e-19
Internal
sp_v3.0_unigene148358 SustainPine v3.0 226
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 5.0e-22
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.839e-13
Internal
sp_v3.0_unigene148365 SustainPine v3.0 400
• AutoFact: Os06g0493000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DC29_ORYSJ 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Internal
sp_v3.0_unigene148461 SustainPine v3.0 580
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 9.94922e-44
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Putative retroelement 2.093e-06
Internal
sp_v3.0_unigene148468 SustainPine v3.0 213
• AutoFact: OSJNBa0004L19.22 protein n=1 Tax=Oryza sativa RepID=Q5JPZ2_ORYSA 7.0e-15
• FL-Next: tr=OSJNBa0004L19.22 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.682e-08
Internal
sp_v3.0_unigene148545 SustainPine v3.0 231
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene148649 SustainPine v3.0 344
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 2.24208e-44
Internal
sp_v3.0_unigene148797 SustainPine v3.0 289
• AutoFact: OSIGBa0118P15.5 protein n=1 Tax=Oryza sativa RepID=Q01KK6_ORYSA 2.0e-12
• FL-Next: tr=OSIGBa0118P15.5 protein; Oryza sativa (Rice). 0.0
Internal
sp_v3.0_unigene148873 SustainPine v3.0 186
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene148931 SustainPine v3.0 430
• AutoFact: Putative reverse transcriptase n=1 Tax=Oryza sativa Japonica Group RepID=Q75H53_ORYSJ 5.0e-25
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.093e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain