Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene139031 SustainPine v3.0 351
• AutoFact: Gag-pol polyprotein (Fragment) n=1 Tax=Panicum virgatum RepID=A4GMN5_9POAL 5.0e-19
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy sub-class 1.573e-07
Internal
sp_v3.0_unigene139428 SustainPine v3.0 349
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.188e-21
Putative Complete
sp_v3.0_unigene139651 SustainPine v3.0 261
• AutoFact: Reverse transcriptase (Fragment) n=3 Tax=Eleocharis cellulosa RepID=D5LVM7_9POAL 1.0e-21
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.668e-31
Internal
sp_v3.0_unigene139780 SustainPine v3.0 436
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 9.99967e-42
• FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
• Sma3: Gag-Pol polyprotein 4.218e-14
Internal
sp_v3.0_unigene143156 SustainPine v3.0 1077
• AutoFact: Os06g0493000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DC29_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.91e-22
Putative C-terminus
sp_v3.0_unigene143493 SustainPine v3.0 386
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Putative C-terminus
sp_v3.0_unigene143502 SustainPine v3.0 522
• AutoFact: RVT_1 domain containing protein 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.706e-21
Putative Complete
sp_v3.0_unigene143696 SustainPine v3.0 384
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.00001e-40
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Putative polyprotein 1.864e-22
Putative C-terminus
sp_v3.0_unigene143764 SustainPine v3.0 408
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 1.0e-31
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified, expressed 4.684e-11
C-terminus
sp_v3.0_unigene143769 SustainPine v3.0 478
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.4013e-45
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene143954 SustainPine v3.0 359
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 6.0e-29
• FL-Next: tr=Putative uncharacterized protein Sb10g020018; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.96e-06
Internal
sp_v3.0_unigene144182 SustainPine v3.0 360
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 8.0e-33
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.747e-36
Putative N-terminus
sp_v3.0_unigene144191 SustainPine v3.0 674
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene144436 SustainPine v3.0 450
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene144517 SustainPine v3.0 702
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Putative retroelement 6.164e-17
Putative Complete
sp_v3.0_unigene144568 SustainPine v3.0 638
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.689e-08
Internal
sp_v3.0_unigene144713 SustainPine v3.0 441
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene144807 SustainPine v3.0 457
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene144834 SustainPine v3.0 559
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.99e-38
Putative Complete
sp_v3.0_unigene144865 SustainPine v3.0 716
• AutoFact: OSJNBa0054D14.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XW39_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 1.726e-16
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain