Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene70745 SustainPine v3.0 361
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 1.0e-34
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene70810 SustainPine v3.0 232
• AutoFact: Gag-pol polyprotein (Fragment) n=1 Tax=Bouteloua hirsuta subsp. pectinata RepID=D2Y6R6_9POAL 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative gag-pol polyprotein 1.685e-09
Putative Complete
sp_v3.0_unigene71005 SustainPine v3.0 348
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 8.0e-27
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene71011 SustainPine v3.0 276
• AutoFact: retrotransposon protein [Beta vulgaris] 4.0e-16
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
N-terminus
sp_v3.0_unigene71029 SustainPine v3.0 405
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.159e-08
Putative Complete
sp_v3.0_unigene71045 SustainPine v3.0 372
• AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 2.0e-38
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.129e-24
Putative N-terminus
sp_v3.0_unigene71056 SustainPine v3.0 327
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.414e-22
Putative Complete
sp_v3.0_unigene71228 SustainPine v3.0 227
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Asparagus officinalis RepID=Q2A9Z5_ASPOF 8.0e-19
• FL-Next: tr=Gag-pol polyprotein, putative; Asparagus officinalis (Garden asparagus). 0.0
Putative C-terminus
sp_v3.0_unigene71363 SustainPine v3.0 269
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 3.0e-13
• FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
Internal
sp_v3.0_unigene71485 SustainPine v3.0 339
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.475e-27
Putative N-terminus
sp_v3.0_unigene71772 SustainPine v3.0 406
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.53899e-40
Putative Complete
sp_v3.0_unigene71899 SustainPine v3.0 368
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.166e-30
Internal
sp_v3.0_unigene72148 SustainPine v3.0 274
• AutoFact: Putative Ty3-gypsy-like retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQ11_ARATH 7.0e-23
• FL-Next: tr=At2g06190; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Gag-Pol polyprotein 9.502e-10
Putative C-terminus
sp_v3.0_unigene72225 SustainPine v3.0 344
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q53P05_ORYSJ 1.0e-21
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.085e-12
Putative N-terminus
sp_v3.0_unigene72373 SustainPine v3.0 332
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene73621 SustainPine v3.0 293
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.451e-16
Putative Complete
sp_v3.0_unigene75719 SustainPine v3.0 282
• AutoFact: Putative Ty3-gypsy-like retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQ09_ARATH 3.0e-25
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.458e-17
Internal
sp_v3.0_unigene76157 SustainPine v3.0 357
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 6.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.832e-19
Putative N-terminus
sp_v3.0_unigene77427 SustainPine v3.0 353
• AutoFact: Beta-galactosidase (Fragment) n=1 Tax=Sandersonia aurantiaca RepID=Q6EM00_SANAU 1.4013e-45
• FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-galactosidase 0.0
Internal
sp_v3.0_unigene77585 SustainPine v3.0 208
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain