Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene68096 SustainPine v3.0 295
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene68379 SustainPine v3.0 322
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Putative Complete
sp_v3.0_unigene68388 SustainPine v3.0 290
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2R4W7_ORYSJ 2.0e-16
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene68566 SustainPine v3.0 334
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 6.0e-39
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.604e-18
Internal
sp_v3.0_unigene68585 SustainPine v3.0 267
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.744e-15
Internal
sp_v3.0_unigene68606 SustainPine v3.0 240
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53NJ3_ORYSJ 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.994e-07
Putative Complete
sp_v3.0_unigene68712 SustainPine v3.0 278
• AutoFact: F15O4.13 n=1 Tax=Arabidopsis thaliana RepID=Q9LQH2_ARATH 2.0e-16
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene69025 SustainPine v3.0 314
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 3.0e-20
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.26e-31
Putative N-terminus
sp_v3.0_unigene69477 SustainPine v3.0 218
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q60ET2_ORYSJ 2.0e-18
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Gag-Pol polyprotein 5.658e-13
C-terminus
sp_v3.0_unigene69666 SustainPine v3.0 268
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 2.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.12e-12
Putative C-terminus
sp_v3.0_unigene69764 SustainPine v3.0 280
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q10GH3_ORYSJ 1.0e-16
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Putative retroelement pol polyprotein 1.724e-06
N-terminus
sp_v3.0_unigene69847 SustainPine v3.0 385
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Brassica napus RepID=Q8W452_BRANA 3.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.343e-29
C-terminus
sp_v3.0_unigene69883 SustainPine v3.0 439
• AutoFact: Chromo domain containing protein 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene69985 SustainPine v3.0 418
• AutoFact: RVT_1 domain containing protein 7.0e-11
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene69994 SustainPine v3.0 472
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Sciadopitys verticillata RepID=Q56GF7_SCIVE 2.0e-23
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.8e-10
Putative Complete
sp_v3.0_unigene70035 SustainPine v3.0 326
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 4.383e-10
Internal
sp_v3.0_unigene70135 SustainPine v3.0 383
• AutoFact: F15O4.13 n=1 Tax=Arabidopsis thaliana RepID=Q9LQH2_ARATH 1.0e-23
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.06e-09
Putative C-terminus
sp_v3.0_unigene70362 SustainPine v3.0 364
• AutoFact: RVT_1 domain containing protein 2.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.452e-12
Putative C-terminus
sp_v3.0_unigene70700 SustainPine v3.0 371
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUF6_ORYSJ 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 3.92e-11
Complete
sp_v3.0_unigene70718 SustainPine v3.0 268
• AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein 4.99e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain