Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retroviral aspartyl protease

Term: IPR013242  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene54660 SustainPine v3.0 424
• AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene54702 SustainPine v3.0 355
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.278e-21
Putative Complete
sp_v3.0_unigene54758 SustainPine v3.0 344
• AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 6.0e-39
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.297e-18
Internal
sp_v3.0_unigene54763 SustainPine v3.0 379
• AutoFact: OSJNBa0017P10.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7F9M4_ORYSJ 2.0e-16
• FL-Next: tr=OSJNBa0017P10.11 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.163e-06
Internal
sp_v3.0_unigene54764 SustainPine v3.0 273
• AutoFact: Os06g0493000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DC29_ORYSJ 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.925e-19
Putative Complete
sp_v3.0_unigene54772 SustainPine v3.0 359
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.626e-21
C-terminus
sp_v3.0_unigene54806 SustainPine v3.0 460
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.966e-26
Putative Complete
sp_v3.0_unigene54946 SustainPine v3.0 344
• AutoFact: pol protein integrase region [Pinus brutia] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 1.87774e-43
Internal
sp_v3.0_unigene54972 SustainPine v3.0 468
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Zea mays RepID=Q8SA91_MAIZE 1.0e-26
• FL-Next: tr=Putative gag-pol polyprotein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene55008 SustainPine v3.0 528
• AutoFact: OSJNBa0070D17.9 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLT9_ORYSJ 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.723e-20
Putative Complete
sp_v3.0_unigene55029 SustainPine v3.0 427
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.827e-20
Putative Complete
sp_v3.0_unigene55072 SustainPine v3.0 188
• AutoFact: Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] 2.0e-13
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.40779e-45
Internal
sp_v3.0_unigene55114 SustainPine v3.0 309
• AutoFact: polyprotein [Primula vulgaris] 6.0e-18
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene55225 SustainPine v3.0 407
• AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.404e-35
Internal
sp_v3.0_unigene55234 SustainPine v3.0 410
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.376e-06
Putative Complete
sp_v3.0_unigene55286 SustainPine v3.0 299
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 3.0e-17
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.005e-08
Internal
sp_v3.0_unigene55294 SustainPine v3.0 203
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 1.0e-16
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.022e-07
Internal
sp_v3.0_unigene55344 SustainPine v3.0 167
• AutoFact: Unassigned protein
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.146e-32
Putative N-terminus
sp_v3.0_unigene55392 SustainPine v3.0 223
• AutoFact: RVT_1 domain containing protein 3.0e-05
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Gag-Pol polyprotein 1.208e-14
Putative C-terminus
sp_v3.0_unigene55494 SustainPine v3.0 454
• AutoFact: Gag-pol n=1 Tax=Zea mays RepID=Q8W1D1_MAIZE 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.584e-39
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain