Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retroviral aspartyl protease

Term: IPR013242  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene167065 SustainPine v3.0 143
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Gossypium barbadense RepID=Q96421_GOSBA 1.0e-08
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.271e-36
Internal
sp_v3.0_unigene167162 SustainPine v3.0 291
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SSW1_RICCO 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Putative N-terminus
sp_v3.0_unigene167226 SustainPine v3.0 218
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-17
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene167370 SustainPine v3.0 239
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.289e-40
Putative Complete
sp_v3.0_unigene167713 SustainPine v3.0 227
• AutoFact: Os02g0712700 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DY65_ORYSJ 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 2.661e-29
Internal
sp_v3.0_unigene167733 SustainPine v3.0 276
• AutoFact: Unassigned protein
• FL-Next: tr=Os08g0273000 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Polyprotein 8.404e-07
Putative C-terminus
sp_v3.0_unigene167908 SustainPine v3.0 300
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 6.177e-38
Internal
sp_v3.0_unigene167979 SustainPine v3.0 245
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 5.0e-15
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene167998 SustainPine v3.0 205
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene168023 SustainPine v3.0 360
• AutoFact: Putative integrase (Fragment) n=7 Tax=Cucumis melo RepID=B0B0F4_CUCME 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.604e-10
Internal
sp_v3.0_unigene168068 SustainPine v3.0 147
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-08
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene168177 SustainPine v3.0 228
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q75HH6_ORYSJ 4.0e-17
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.14399e-43
Internal
sp_v3.0_unigene168296 SustainPine v3.0 118
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Morus bombycis RepID=Q9AVM8_9ROSA 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Reverse transcriptase 1.4013e-45
Internal
sp_v3.0_unigene183452 SustainPine v3.0 597
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.833e-30
C-terminus
sp_v3.0_unigene185112 SustainPine v3.0 317
• AutoFact: Integrase (Fragment) n=1 Tax=Gossypium herbaceum RepID=Q7XYU4_GOSHE 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.085e-09
Internal
sp_v3.0_unigene185359 SustainPine v3.0 599
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.416e-08
Internal
sp_v3.0_unigene186261 SustainPine v3.0 353
• AutoFact: retrotransposable element Tf2 155 kDa protein type 1-like 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.609e-15
Internal
sp_v3.0_unigene186492 SustainPine v3.0 526
• AutoFact: Polyprotein n=1 Tax=Oryza australiensis RepID=Q0ZLH4_9ORYZ 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative C-terminus
sp_v3.0_unigene186908 SustainPine v3.0 466
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.7e-21
Putative Complete
sp_v3.0_unigene187222 SustainPine v3.0 507
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.47105e-41
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain