Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Retrotransposon gag protein

Term: IPR005162  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene165811 SustainPine v3.0 407
• AutoFact: OSIGBa0118P15.5 protein n=1 Tax=Oryza sativa RepID=Q01KK6_ORYSA 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene165858 SustainPine v3.0 537
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.208e-17
Internal
sp_v3.0_unigene165892 SustainPine v3.0 200
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 1.0e-16
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy sub-class; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.368e-36
Putative C-terminus
sp_v3.0_unigene165974 SustainPine v3.0 353
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 5.0e-26
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene166089 SustainPine v3.0 371
• AutoFact: Chromo domain containing protein 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene166264 SustainPine v3.0 467
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene166295 SustainPine v3.0 345
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-26
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Pol protein integrase region 1.46001e-41
Internal
sp_v3.0_unigene166312 SustainPine v3.0 333
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 5.983e-39
Internal
sp_v3.0_unigene166338 SustainPine v3.0 203
• AutoFact: LRR receptor-like serine/threonine-protein kinase HSL2 n=2 Tax=Arabidopsis RepID=HSL2_ARATH 7.0e-16
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 1.199e-18
Internal
sp_v3.0_unigene166355 SustainPine v3.0 265
• AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 5.0e-14
• FL-Next: tr=Pol protein; Cucumis melo subsp. melo. 0.0
Internal
sp_v3.0_unigene166387 SustainPine v3.0 451
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZU8_ORYSJ 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein, putative 1.953e-06
N-terminus
sp_v3.0_unigene166453 SustainPine v3.0 539
• AutoFact: Putative gag-pol polyprotein, identical [Solanum demissum] 1.0e-33
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene166617 SustainPine v3.0 494
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 4.92e-11
C-terminus
sp_v3.0_unigene166626 SustainPine v3.0 193
• AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE 2.0e-18
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 7.858e-20
Putative C-terminus
sp_v3.0_unigene166646 SustainPine v3.0 475
• AutoFact: Hcr2-0B n=1 Tax=Solanum lycopersicum RepID=Q9ZTJ9_SOLLC 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flagellin-sensing 2-like protein 6.369e-35
Internal
sp_v3.0_unigene166715 SustainPine v3.0 308
• AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 4.717e-12
Internal
sp_v3.0_unigene166801 SustainPine v3.0 451
• AutoFact: cytochrome P450 [Panax ginseng] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flavonoid 3-monooxygenase 2.544e-15
C-terminus
sp_v3.0_unigene167065 SustainPine v3.0 143
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Gossypium barbadense RepID=Q96421_GOSBA 1.0e-08
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.271e-36
Internal
sp_v3.0_unigene167118 SustainPine v3.0 270
• AutoFact: Receptor-like kinase (Fragment) n=1 Tax=Hordeum vulgare RepID=Q9SWU6_HORVU 1.0e-12
• FL-Next: sp=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative rust resistance kinase Lr10 6.218e-20
Internal
sp_v3.0_unigene167122 SustainPine v3.0 314
• AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] dbj|BAD33650.1| putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] gb|EAZ44777.1| hypothetical protein OsJ_29408 [Oryza sativa Japonica Gr 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase-like protein 4.104e-26
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain