Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene27218 SustainPine v3.0 392
AutoFact: 40S ribosomal protein S19-1 n=8 Tax=Arabidopsis RepID=RS191_ARATH 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S19 1.268e-13
C-terminus
sp_v3.0_unigene27508 SustainPine v3.0 1270
AutoFact: receptor lectin kinase [Arabidopsis thaliana] sp|O80939.1|LRK41_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.1; Short=Arabidopsis thaliana lectin-receptor kinase e; Short=AthlecRK-e; Short=LecRK-IV.1; AltName: Full=Lectin Recepto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 3.066e-26
Putative C-terminus
sp_v3.0_unigene27595 SustainPine v3.0 910
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.211e-19
Complete
sp_v3.0_unigene27663 SustainPine v3.0 1756
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene27830 SustainPine v3.0 1261
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein A, putative n=1 Tax=Ricinus communis RepID=B9S7W0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.07199e-41
Complete
sp_v3.0_unigene27911 SustainPine v3.0 4761
AutoFact: RecName: Full=Serine/threonine-protein kinase Nek5; AltName: Full=NimA-related protein kinase 5; AltName: Full=OsNek5 dbj|BAB63817.1| putative LSTK-1-like kinase [Oryza sativa Japonica Group] dbj|BAC01197.1| putative LSTK-1-like kinase [Oryza sativa Japon 0.0
FL-Next: sp=Serine/threonine-protein kinase Nek5; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Serine/threonine-protein kinase Nek4 3.12e-11
Complete
sp_v3.0_unigene27918 SustainPine v3.0 474
AutoFact: PLAC8 domain containing protein 8.00141e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PGPS/D12 1.109e-19
N-terminus
sp_v3.0_unigene27945 SustainPine v3.0 777
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 9.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene27977 SustainPine v3.0 2440
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At4g14240; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene28431 SustainPine v3.0 760
AutoFact: putative MATE family protein [Oryza sativa Japonica Group] gb|EEE59381.1| hypothetical protein OsJ_11497 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Putative C-terminus
sp_v3.0_unigene28461 SustainPine v3.0 2009
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At4g14240; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene28648 SustainPine v3.0 534
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene28658 SustainPine v3.0 2149
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: At4g36060-like protein 3.211e-07
Complete
sp_v3.0_unigene28683 SustainPine v3.0 580
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 3.399e-08
Putative C-terminus
sp_v3.0_unigene28732 SustainPine v3.0 1018
AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 5.60519e-45
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Putative N-terminus
sp_v3.0_unigene28836 SustainPine v3.0 1203
AutoFact: [R] COG0457 FOG: TPR repeat 5.0e-10
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene28886 SustainPine v3.0 449
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AAB60741.1| F21M12.27 gene product [Arabidopsis thaliana] gb|AEE28510.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 1.344e-27
Putative N-terminus
sp_v3.0_unigene29170 SustainPine v3.0 681
AutoFact: UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucosyltransferase, putative 2.027e-32
C-terminus
sp_v3.0_unigene29248 SustainPine v3.0 530
AutoFact: lipase-3 domain-containing protein [Arabidopsis thaliana] gb|AAG51101.1|AC025295_9 lipase, putative [Arabidopsis thaliana] gb|AEE31210.1| lipase-3 domain-containing protein [Arabidopsis thaliana] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Triacylglycerol lipase like protein 3.433e-08
Internal
sp_v3.0_unigene29308 SustainPine v3.0 599
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain