Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene25063 SustainPine v3.0 308
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=2 Tax=Oryza sativa Japonica Group RepID=Q53KQ8_ORYSJ 1.0e-20
• FL-Next: tr=OSJNBa0074B10.8 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.656e-29
Internal
sp_v3.0_unigene25224 SustainPine v3.0 1176
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.808e-16
N-terminus
sp_v3.0_unigene25234 SustainPine v3.0 586
• AutoFact: Probable xyloglucan endotransglucosylase/hydrolase protein 5 n=3 Tax=Arabidopsis RepID=XTH5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 4.884e-39
Putative C-terminus
sp_v3.0_unigene25256 SustainPine v3.0 1872
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 5.0e-40
• FL-Next: sp=Nuclear transcription factor Y subunit A-7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Nuclear transcription factor Y subunit A-3 1.432e-16
Complete
sp_v3.0_unigene25292 SustainPine v3.0 150
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene25301 SustainPine v3.0 421
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene25432 SustainPine v3.0 217
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-11
• FL-Next: tr=Os07g0510800 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Os02g0309600 protein 6.823e-06
Internal
sp_v3.0_unigene25509 SustainPine v3.0 250
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Orobanche cernua var. cumana RepID=Q27U10_OROCE 2.0e-15
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene25778 SustainPine v3.0 526
• AutoFact: RNase L inhibitor-like protein n=1 Tax=Ectocarpus siliculosus RepID=D8LC25_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 5.026e-11
C-terminus
sp_v3.0_unigene25791 SustainPine v3.0 531
• AutoFact: ribosomal protein S19 [Homo sapiens] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S19 3.212e-17
Putative Complete
sp_v3.0_unigene25841 SustainPine v3.0 644
• AutoFact: RNase L inhibitor-like protein n=1 Tax=Ectocarpus siliculosus RepID=D8LC25_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 5.026e-11
C-terminus
sp_v3.0_unigene25950 SustainPine v3.0 447
• AutoFact: Os06g0493000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DC29_ORYSJ 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene26023 SustainPine v3.0 983
• AutoFact: DUF659 domain containing protein 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene26631 SustainPine v3.0 764
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SMM3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 5.291e-33
Putative C-terminus
sp_v3.0_unigene26832 SustainPine v3.0 1524
• AutoFact: Cinnamoyl-CoA reductase n=3 Tax=Pinaceae RepID=B3VKE9_9CONI 0.0
• FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cinnamoyl-CoA reductase 0.0
Putative Complete
sp_v3.0_unigene26840 SustainPine v3.0 3030
• AutoFact: Protein phosphatase 2C n=1 Tax=Zea mays RepID=B6U2F2_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 1.151e-08
Complete
sp_v3.0_unigene26875 SustainPine v3.0 277
• AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.13e-37
Putative Complete
sp_v3.0_unigene26997 SustainPine v3.0 903
• AutoFact: lectin-like receptor kinase 7;3 [Medicago truncatula] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 1.847e-35
C-terminus
sp_v3.0_unigene27091 SustainPine v3.0 469
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-19
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene27095 SustainPine v3.0 799
• AutoFact: Integral membrane protein, putative n=4 Tax=Brassicaceae RepID=Q8LPI3_ARATH 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transparent testa 12 protein 4.183e-10
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain