Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene168042 SustainPine v3.0 130
• AutoFact: Os07g0132500 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0D8S4_ORYSJ 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 6.976e-27
Internal
sp_v3.0_unigene168068 SustainPine v3.0 147
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-08
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene168169 SustainPine v3.0 198
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=Q9ZQF8_ARATH 3.0e-11
• FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene168177 SustainPine v3.0 228
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q75HH6_ORYSJ 4.0e-17
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.14399e-43
Internal
sp_v3.0_unigene168296 SustainPine v3.0 118
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Morus bombycis RepID=Q9AVM8_9ROSA 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Reverse transcriptase 1.4013e-45
Internal
sp_v3.0_unigene182862 SustainPine v3.0 885
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein Sb06g013680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Putative C-terminus
sp_v3.0_unigene183219 SustainPine v3.0 541
• AutoFact: catalytic, putative (EC:2.4.1.224) 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene183247 SustainPine v3.0 607
• AutoFact: Peptidyl-prolyl cis-trans isomerase-like 3 n=2 Tax=Dictyostelium RepID=PPIL3_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene183349 SustainPine v3.0 334
• AutoFact: Callose synthase 5 n=5 Tax=Arabidopsis RepID=CALS5_ARATH 1.0e-39
• FL-Next: sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 1,3-beta-glucan synthase 5.96e-28
Internal
sp_v3.0_unigene183384 SustainPine v3.0 492
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTQ7_ORYSJ 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.607e-15
Internal
sp_v3.0_unigene183452 SustainPine v3.0 597
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.833e-30
C-terminus
sp_v3.0_unigene183950 SustainPine v3.0 1021
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTQ7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.609e-09
N-terminus
sp_v3.0_unigene184262 SustainPine v3.0 626
• AutoFact: Integrase n=2 Tax=Beta vulgaris RepID=A2I5F8_BETVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.667e-27
Putative C-terminus
sp_v3.0_unigene184472 SustainPine v3.0 341
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene184567 SustainPine v3.0 689
• AutoFact: rve domain containing protein 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene184696 SustainPine v3.0 464
• AutoFact: JmjC domain containing protein 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 4.799e-08
Putative Complete
sp_v3.0_unigene185112 SustainPine v3.0 317
• AutoFact: Integrase (Fragment) n=1 Tax=Gossypium herbaceum RepID=Q7XYU4_GOSHE 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.085e-09
Internal
sp_v3.0_unigene185359 SustainPine v3.0 599
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.416e-08
Internal
sp_v3.0_unigene185368 SustainPine v3.0 470
• AutoFact: Exostosin-like [Medicago truncatula] gb|ABK28848.1| exostosin-like protein [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic, putative 1.205e-10
Putative C-terminus
sp_v3.0_unigene185606 SustainPine v3.0 593
• AutoFact: Polyprotein n=1 Tax=Solanum lycopersicum RepID=Q9ZS84_SOLLC 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain