Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Nucleotide binding protein, PINc

Term: IPR006596  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1311 SustainPine v3.0 1490
AutoFact: Fcf1 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3438 SustainPine v3.0 591
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene3729 SustainPine v3.0 2650
AutoFact: RNA-binding protein nob1, putative n=1 Tax=Ricinus communis RepID=B9RC94_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene11115 SustainPine v3.0 1748
AutoFact: Fcf1 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18063 SustainPine v3.0 1467
AutoFact: Fcf1 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene19907 SustainPine v3.0 1308
AutoFact: exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana] gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative mitotic control protein dis3 5.087e-09
Putative C-terminus
sp_v3.0_unigene24183 SustainPine v3.0 1329
AutoFact: Fcf1 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein C14orf111, putative 0.0
Complete
sp_v3.0_unigene28951 SustainPine v3.0 1756
AutoFact: rRNA-processing protein UTP23, putative n=1 Tax=Ricinus communis RepID=B9SW27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene37702 SustainPine v3.0 3625
AutoFact: exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana] gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene42750 SustainPine v3.0 720
AutoFact: putative 3'-5' exoribonuclease, 3' partial; 3320-1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene58432 SustainPine v3.0 434
AutoFact: putative 3'-5' exoribonuclease, 3' partial; 3320-1 [Arabidopsis thaliana] 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS) 1.158e-08
Internal
sp_v3.0_unigene101350 SustainPine v3.0 884
AutoFact: RNA-binding protein NOB1 [Arabidopsis thaliana] dbj|BAB09721.1| unnamed protein product [Arabidopsis thaliana] gb|AED94652.1| RNA-binding protein NOB1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene128198 SustainPine v3.0 730
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene142322 SustainPine v3.0 1144
AutoFact: Fcf1 domain containing protein 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene143623 SustainPine v3.0 503
AutoFact: Fcf1 domain containing protein 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151194 SustainPine v3.0 447
AutoFact: rRNA-processing protein FCF1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NJJ7_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157371 SustainPine v3.0 448
AutoFact: rRNA-processing protein FCF1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NJJ7_PHYIT 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain