Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19049 SustainPine v3.0 517
AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SKL4_RICCO 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene19207 SustainPine v3.0 2756
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: sp=ABC transporter B family member 25; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Chromosome chr17 scaffold_101, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene19233 SustainPine v3.0 441
AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SAP4_RICCO 3.00004e-41
FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug resistance protein ABC transporter family 2.874e-06
Internal
sp_v3.0_unigene19805 SustainPine v3.0 671
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IJP4_POPTR 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene19913 SustainPine v3.0 423
AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 2.0e-39
FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 3.384e-06
Internal
sp_v3.0_unigene20343 SustainPine v3.0 996
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9I7G6_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene21544 SustainPine v3.0 491
AutoFact: Cysteine protease n=2 Tax=Vitis vinifera RepID=A9UFX8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cysteine proteinase 2.99878e-43
C-terminus
sp_v3.0_unigene21953 SustainPine v3.0 463
AutoFact: ABC transporter B family member 10 [Arabidopsis thaliana] sp|Q9SGY1.2|AB10B_ARATH RecName: Full=ABC transporter B family member 10; Short=ABC transporter ABCB.10; Short=AtABCB10; AltName: Full=Multidrug resistance protein 10; AltName: Full=P-glycoprotein 1.0e-33
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene22038 SustainPine v3.0 571
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene22928 SustainPine v3.0 1209
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene23539 SustainPine v3.0 1249
AutoFact: UPF0029 domain containing protein 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene25740 SustainPine v3.0 2292
AutoFact: SAND family protein [Arabidopsis thaliana] gb|AAL10492.1| At2g28390/T1B3.9 [Arabidopsis thaliana] gb|AAD20687.2| expressed protein [Arabidopsis thaliana] gb|AAM91354.1| At2g28390/T1B3.9 [Arabidopsis thaliana] dbj|BAC42668.1| unknown protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene26232 SustainPine v3.0 396
AutoFact: ABC transporter family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23AM3_TETTH 7.0e-31
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene26701 SustainPine v3.0 1698
AutoFact: ABC transporter B family member 15 n=3 Tax=Arabidopsis RepID=AB15B_ARATH 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene27266 SustainPine v3.0 653
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.992e-37
Internal
sp_v3.0_unigene28900 SustainPine v3.0 677
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein 1, 2, putative 2.608e-26
Internal
sp_v3.0_unigene29048 SustainPine v3.0 5411
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance protein ABC transporter family 7.709e-17
Complete
sp_v3.0_unigene29192 SustainPine v3.0 777
AutoFact: ATP-binding cassette transporter n=3 Tax=Ectocarpus siliculosus RepID=D7FHL6_ECTSI 9.0e-35
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene29349 SustainPine v3.0 619
AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene30987 SustainPine v3.0 615
AutoFact: Multidrug resistance protein 1, 2, putative n=1 Tax=Ricinus communis RepID=B9SA21_RICCO 8.99634e-43
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain