Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene125226 SustainPine v3.0 233
• AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 9.0e-18
• FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 2.589e-06
Internal
sp_v3.0_unigene125353 SustainPine v3.0 306
• AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GJX7_POPTR 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene126227 SustainPine v3.0 520
• AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 1.745e-31
Internal
sp_v3.0_unigene128835 SustainPine v3.0 620
• AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GJX7_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative Complete
sp_v3.0_unigene129404 SustainPine v3.0 398
• AutoFact: MRP-like ABC transporter n=2 Tax=Oryza sativa Japonica Group RepID=Q8GU62_ORYSJ 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 1.123e-29
C-terminus
sp_v3.0_unigene131120 SustainPine v3.0 645
• AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.57e-31
Internal
sp_v3.0_unigene131381 SustainPine v3.0 259
• AutoFact: ATP-binding cassette transporter, subfamily C, member 9, SmABCC9 n=2 Tax=Selaginella moellendorffii RepID=D8RCF5_SELML 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene131460 SustainPine v3.0 249
• AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] 1.0e-22
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene131797 SustainPine v3.0 512
• AutoFact: ATP-binding cassette transporter, subfamily C, member 4, SmABCC4 n=2 Tax=Selaginella moellendorffii RepID=D8RHJ5_SELML 7.00649e-43
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene132052 SustainPine v3.0 629
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IJP4_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene134189 SustainPine v3.0 303
• AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 3.0e-19
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 3.072e-11
Internal
sp_v3.0_unigene136270 SustainPine v3.0 445
• AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SAP4_RICCO 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene136892 SustainPine v3.0 276
• AutoFact: ATP-binding cassette transporter, subfamily B, member 18, group MDR/PGP protein PpABCB18 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU14_PHYPA 5.0e-15
• FL-Next: sp=ABC transporter B family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene139762 SustainPine v3.0 436
• AutoFact: Cyclic peptide transporter n=1 Tax=Medicago truncatula RepID=Q2HRY7_MEDTR 5.0e-10
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 2.274e-23
Internal
sp_v3.0_unigene143607 SustainPine v3.0 300
• AutoFact: PREDICTED: similar to ABC transporter family protein n=1 Tax=Vitis vinifera RepID=UPI0001985B98 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.696e-09
Putative Complete
sp_v3.0_unigene145745 SustainPine v3.0 594
• AutoFact: Cysteine protease n=2 Tax=Vitis vinifera RepID=A9UFX8_VITVI 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 5.27e-38
C-terminus
sp_v3.0_unigene145757 SustainPine v3.0 322
• AutoFact: Cysteine protease n=2 Tax=Vitis vinifera RepID=A9UFX8_VITVI 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 1.183e-40
Misassembled
sp_v3.0_unigene146096 SustainPine v3.0 452
• AutoFact: Cysteine proteinase n=2 Tax=Ipomoea RepID=Q6UB43_IPOBA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 1.79e-40
Internal
sp_v3.0_unigene147985 SustainPine v3.0 285
• AutoFact: ATP-binding cassette transporter, subfamily C, member 4, group MRP protein PpABCC4 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SV23_PHYPA 3.0e-18
• FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-binding cassette transporter, subfamily C, member 4, group MRP protein PpABCC4 6.823e-06
Internal
sp_v3.0_unigene148731 SustainPine v3.0 312
• AutoFact: ABC transporter B family member 28 n=4 Tax=Arabidopsis thaliana RepID=AB28B_ARATH 2.00386e-43
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain