Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene97372 SustainPine v3.0 396
• AutoFact: ABC transporter B family member 29 [Arabidopsis thaliana] sp|Q9LZB8.1|AB29B_ARATH RecName: Full=ABC transporter B family member 29, chloroplastic; Short=ABC transporter ABCB.29; Short=AtABCB29; AltName: Full=ABC2 homolog 12; Flags: Precursor emb|CAB85511. 1.0e-29
• FL-Next: sp=ABC transporter B family member 29, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene97501 SustainPine v3.0 278
• AutoFact: ABC transporter-like protein (Fragment) n=2 Tax=Picea sitchensis RepID=E0ZDW2_PICSI 2.0e-25
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene97560 SustainPine v3.0 494
• AutoFact: PREDICTED: similar to ABC transporter family protein n=1 Tax=Vitis vinifera RepID=UPI0001985B98 5.99994e-41
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene97599 SustainPine v3.0 299
• AutoFact: ATP-binding cassette transporter, subfamily B, member 1, group LLP protein PpABCB1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RKI2_PHYPA 1.0e-24
• FL-Next: sp=ABC transporter B family member 29, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene97714 SustainPine v3.0 284
• AutoFact: [V] COG1132 ABC-type multidrug transport system, ATPase and permease components 0.0001
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 1.8e-16
Internal
sp_v3.0_unigene97768 SustainPine v3.0 208
• AutoFact: ABC transporter B family member 6 [Arabidopsis thaliana] sp|Q8LPT1.2|AB6B_ARATH RecName: Full=ABC transporter B family member 6; Short=ABC transporter ABCB.6; Short=AtABCB6; AltName: Full=Multidrug resistance protein 6; AltName: Full=P-glycoprotein 6 gb|A 7.0e-23
• FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 3.384e-06
Internal
sp_v3.0_unigene98787 SustainPine v3.0 832
• AutoFact: ATNAP8, putative n=1 Tax=Ricinus communis RepID=B9R9H4_RICCO 0.0
• FL-Next: Isoform 3 of ABC transporter B family member 28 OS=Arabidopsis thaliana GN=ABCB28 0.0
Internal
sp_v3.0_unigene98858 SustainPine v3.0 269
• AutoFact: ABC transporter B family member 6 [Arabidopsis thaliana] sp|Q8LPT1.2|AB6B_ARATH RecName: Full=ABC transporter B family member 6; Short=ABC transporter ABCB.6; Short=AtABCB6; AltName: Full=Multidrug resistance protein 6; AltName: Full=P-glycoprotein 6 gb|A 3.0e-37
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene99235 SustainPine v3.0 390
• AutoFact: Os01g0911300 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0JGQ4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene99403 SustainPine v3.0 348
• AutoFact: ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRT8_PHYPA 7.0e-18
• FL-Next: sp=ABC transporter B family member 26, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Abc transporter, putative 9.479e-07
Internal
sp_v3.0_unigene99707 SustainPine v3.0 970
• AutoFact: MDR-like ABC transporter n=1 Tax=Catharanthus roseus RepID=A5X7X7_CATRO 8.0e-27
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein 1, 2, putative 1.7e-12
Internal
sp_v3.0_unigene100316 SustainPine v3.0 544
• AutoFact: [V] COG1132 ABC-type multidrug transport system, ATPase and permease components 2.0e-11
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 2.954e-22
Internal
sp_v3.0_unigene100697 SustainPine v3.0 792
• AutoFact: multidrug resistance-associated protein (MRP)-like; ABC-transporter-like protein [Arabidopsis thaliana] 2.0e-17
• FL-Next: sp=ABC transporter C family member 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene100902 SustainPine v3.0 437
• AutoFact: multidrug resistance protein associated1 [Zea mays] gb|AAO72315.1| multidrug resistance associated protein 1 [Zea mays] gb|AAO72316.1| multidrug resistance associated protein 1 [Zea mays] 3.0e-20
• FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
• Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 5.162e-06
Internal
sp_v3.0_unigene102112 SustainPine v3.0 870
• AutoFact: Multidrug resistance-associated protein 1, 3 (Mrp1, 3), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9RIN7_RICCO 0.0
• FL-Next: sp=ABC transporter C family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 5.238e-17
Internal
sp_v3.0_unigene102820 SustainPine v3.0 824
• AutoFact: Multidrug resistance-associated protein, putative n=1 Tax=Ricinus communis RepID=B9RGL4_RICCO 0.0
• FL-Next: sp=ABC transporter C family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 3.725e-06
Internal
sp_v3.0_unigene102917 SustainPine v3.0 516
• AutoFact: ATP-binding cassette transporter, subfamily B, member 5, group TAP protein PpABCB5 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TQ95_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Abc transporter, putative 8.361e-07
N-terminus
sp_v3.0_unigene102985 SustainPine v3.0 612
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 4.00001e-40
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene103838 SustainPine v3.0 304
• AutoFact: ATP-binding cassette transporter, subfamily C, member 15, group MRP protein PpABCC15 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4I9_PHYPA 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative N-terminus
sp_v3.0_unigene103959 SustainPine v3.0 313
• AutoFact: MRP-like ABC transporter n=4 Tax=Oryza sativa RepID=Q8GU64_ORYSJ 3.0e-07
• FL-Next: sp=ABC transporter C family member 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 6.769e-07
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain