Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Gonadotropin, beta subunit, conserved site

Term: IPR018245  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene144985 SustainPine v3.0 477
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GASA-like protein 1.318e-08
Putative Complete
sp_v3.0_unigene145338 SustainPine v3.0 543
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GASA-like protein 6.35e-17
C-terminus
sp_v3.0_unigene149471 SustainPine v3.0 250
AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 2.0e-08
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 9.004e-40
Internal
sp_v3.0_unigene155540 SustainPine v3.0 571
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Hemerocallis hybrid cultivar RepID=O81658_HEMSP 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyltransferase, putative 1.912e-33
Internal
sp_v3.0_unigene161276 SustainPine v3.0 452
AutoFact: Cellulose synthase-like protein D1 n=2 Tax=Oryza sativa RepID=CSLD1_ORYSJ 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene183987 SustainPine v3.0 852
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyltransferase, putative 1.741e-36
C-terminus
sp_v3.0_unigene188035 SustainPine v3.0 1087
AutoFact: Pyruvate decarboxylase, putative n=1 Tax=Ricinus communis RepID=B9S976_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate decarboxylase 0.0
C-terminus
sp_v3.0_unigene190952 SustainPine v3.0 314
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-ketoacyl-coa synthase family protein 8.26766e-44
Putative C-terminus
sp_v3.0_unigene202954 SustainPine v3.0 390
AutoFact: pfam02704, GASA, Gibberellin regulated protein 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 1, putative 3.845e-13
Putative Complete
sp_v3.0_unigene208488 SustainPine v3.0 858
AutoFact: pfam02704, GASA, Gibberellin regulated protein 3.0e-28
FL-Next: sp=Snakin-2; Solanum tuberosum (Potato). 0.0
Sma3: Gibberellin-regulated protein 1, putative 8.615e-13
Complete
sp_v3.0_unigene210352 SustainPine v3.0 2413
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain