Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Gonadotropin, beta subunit, conserved site

Term: IPR018245  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene126253 SustainPine v3.0 915
• AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 1.704e-28
Putative N-terminus
sp_v3.0_unigene126821 SustainPine v3.0 1665
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 4.867e-31
Putative Complete
sp_v3.0_unigene126936 SustainPine v3.0 1486
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.4083e-42
Misassembled
sp_v3.0_unigene127017 SustainPine v3.0 1377
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 2.252e-36
C-terminus
sp_v3.0_unigene127025 SustainPine v3.0 966
• AutoFact: Pyruvate decarboxylase 1 n=1 Tax=Lotus corniculatus RepID=Q84V95_LOTCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyruvate decarboxylase 0.0
C-terminus
sp_v3.0_unigene127317 SustainPine v3.0 958
• AutoFact: Pyruvate decarboxylase 1 n=1 Tax=Lotus corniculatus RepID=Q84V95_LOTCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyruvate decarboxylase 0.0
C-terminus
sp_v3.0_unigene127473 SustainPine v3.0 637
• AutoFact: Pyruvate decarboxylase 1 (Fragment) n=1 Tax=Petunia x hybrida RepID=Q5BN14_PETHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyruvate decarboxylase 1.06359e-42
Internal
sp_v3.0_unigene127848 SustainPine v3.0 1378
• AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 3.631e-36
C-terminus
sp_v3.0_unigene127997 SustainPine v3.0 1138
• AutoFact: 3-ketoacyl-CoA synthase n=7 Tax=Poaceae RepID=C5YVX8_SORBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-coa synthase family protein 0.0
Complete
sp_v3.0_unigene128667 SustainPine v3.0 579
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.375e-33
Internal
sp_v3.0_unigene129846 SustainPine v3.0 602
• AutoFact: Cellulose synthase 6 n=5 Tax=rosids RepID=Q2IB38_EUCGR 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene130746 SustainPine v3.0 507
• AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cellulose synthase 1.4013e-45
Internal
sp_v3.0_unigene130968 SustainPine v3.0 243
• AutoFact: cellulose synthase 4 [Eucalyptus grandis] 3.0e-37
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene132326 SustainPine v3.0 341
• AutoFact: pfam02704, GASA, Gibberellin regulated protein 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gibberellin-regulated protein 1, putative 9.26e-13
Putative Complete
sp_v3.0_unigene136252 SustainPine v3.0 238
• AutoFact: Cellulose synthase n=2 Tax=rosids RepID=B9HA33_POPTR 9.0e-31
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene142274 SustainPine v3.0 555
• AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GASA-like protein 1.418e-12
Putative Complete
sp_v3.0_unigene142528 SustainPine v3.0 448
• AutoFact: Cytochrome c oxidase subunit Vb n=1 Tax=Oryza sativa Japonica Group RepID=P92683_ORYSJ 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c oxidase subunit Vb 2.314e-12
C-terminus
sp_v3.0_unigene143438 SustainPine v3.0 513
• AutoFact: Cytochrome c oxidase subunit Vb n=1 Tax=Oryza sativa Japonica Group RepID=P92683_ORYSJ 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene143858 SustainPine v3.0 501
• AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene144123 SustainPine v3.0 554
• AutoFact: cytochrome c oxidase family protein-like [Solanum tuberosum] 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c oxidase subunit Vb 2.835e-12
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain