Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Gonadotropin, beta subunit, conserved site

Term: IPR018245  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene46810 SustainPine v3.0 602
AutoFact: pfam02704, GASA, Gibberellin regulated protein 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 2 2.647e-24
Complete
sp_v3.0_unigene46989 SustainPine v3.0 366
AutoFact: cellulose synthase-like protein D3 [Arabidopsis thaliana] sp|Q9M9M4.1|CSLD3_ARATH RecName: Full=Cellulose synthase-like protein D3; Short=AtCslD3; AltName: Full=Protein KOJAK gb|AAF26119.1|AC012328_22 putative cellulose synthase catalytic subunit [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 5.32493e-44
Internal
sp_v3.0_unigene47852 SustainPine v3.0 845
AutoFact: Gibberellin-regulated protein 2, putative n=1 Tax=Ricinus communis RepID=B9SLF4_RICCO 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 2 2.994e-20
Complete
sp_v3.0_unigene48449 SustainPine v3.0 1004
AutoFact: origin recognition complex subunit 3 [Zea mays] gb|AAL10454.1|AF417483_1 origin recognition complex subunit 3 [Zea mays] 9.0e-27
FL-Next: tr=Origin recognition complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus
sp_v3.0_unigene50866 SustainPine v3.0 830
AutoFact: Gibberellin-regulated protein 1, putative n=1 Tax=Ricinus communis RepID=B9SLF3_RICCO 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 1, putative 1.901e-08
Complete
sp_v3.0_unigene51694 SustainPine v3.0 1336
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene52998 SustainPine v3.0 398
AutoFact: extensin, proline-rich protein, putative 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 1, putative 4.357e-13
Putative C-terminus
sp_v3.0_unigene54319 SustainPine v3.0 343
AutoFact: origin recognition complex subunit 3 [Arabidopsis thaliana] gb|AAT37463.1| origin recognition complex protein 3 [Arabidopsis thaliana] gb|AED92326.1| origin recognition complex subunit 3 [Arabidopsis thaliana] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene57097 SustainPine v3.0 318
AutoFact: Pyruvate decarboxylase n=3 Tax=Arabidopsis RepID=Q96536_ARATH 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate decarboxylase 1.69e-39
Internal
sp_v3.0_unigene59659 SustainPine v3.0 244
AutoFact: cellulose synthase-like D2 [Physcomitrella patens] 2.0e-27
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene60535 SustainPine v3.0 328
AutoFact: cytochrome c oxidase subunit Vb [Arabidopsis thaliana] gb|AEE75707.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana] 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome c oxidase subunit Vb 3.386e-08
N-terminus
sp_v3.0_unigene64606 SustainPine v3.0 161
AutoFact: Cellulose synthase [Medicago truncatula] 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 4.2039e-45
Internal
sp_v3.0_unigene65612 SustainPine v3.0 201
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 2.0e-18
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene65853 SustainPine v3.0 215
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 1.0e-14
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 2.222e-34
Internal
sp_v3.0_unigene67427 SustainPine v3.0 379
AutoFact: RecName: Full=Snakin-2; Flags: Precursor emb|CAC44012.1| snakin2 [Solanum tuberosum] gb|ACF74550.2| snakin-2 [Solanum tuberosum] gb|ACF74551.2| snakin-2 [Solanum tuberosum] gb|ACF74552.2| snakin-2 [Solanum tuberosum] gb|AEE98996.1| snakin-2 [Solanum tuber 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 1, putative 2.894e-17
Putative Complete
sp_v3.0_unigene71282 SustainPine v3.0 382
AutoFact: putative gibberellin-regulated protein [Arabidopsis thaliana] ref|NP_001185065.1| putative gibberellin-regulated protein [Arabidopsis thaliana] ref|NP_001185066.1| putative gibberellin-regulated protein [Arabidopsis thaliana] dbj|BAC43377.1| putative gibb 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 2 9.653e-25
Putative Complete
sp_v3.0_unigene76363 SustainPine v3.0 391
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 1.0e-37
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene76824 SustainPine v3.0 252
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 4.0e-30
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Cellulose synthase 0.0
Putative C-terminus
sp_v3.0_unigene80651 SustainPine v3.0 213
AutoFact: Cellulose synthase 5, glycosyltransferase family 2 n=3 Tax=Physcomitrella patens RepID=A9RUW7_PHYPA 5.0e-14
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 9.105e-29
Internal
sp_v3.0_unigene93835 SustainPine v3.0 733
AutoFact: origin recognition complex3 [Oryza sativa Japonica Group] 8.0e-09
FL-Next: tr=Origin recognition complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Os10g0402200 protein 8.772e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain