Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Gonadotropin, beta subunit, conserved site

Term: IPR018245  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20369 SustainPine v3.0 1079
AutoFact: pfam02704, GASA, Gibberellin regulated protein 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 2 4.22e-25
Complete
sp_v3.0_unigene21206 SustainPine v3.0 1087
AutoFact: gibberellin regulated protein [Gossypium arboreum] gb|AAO33908.1| gibberellin regulated protein [Gossypium raimondii] gb|AAO33909.1| gibberellin regulated protein [Gossypium barbadense] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene21264 SustainPine v3.0 963
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyltransferase, putative 3.116e-39
C-terminus
sp_v3.0_unigene21293 SustainPine v3.0 1109
AutoFact: pfam02704, GASA, Gibberellin regulated protein 5.0e-28
FL-Next: sp=Snakin-2; Solanum tuberosum (Potato). 0.0
Sma3: Gibberellin-regulated protein 1, putative 7.226e-13
Complete
sp_v3.0_unigene26903 SustainPine v3.0 734
AutoFact: Gibberellin-regulated protein 2, putative n=1 Tax=Ricinus communis RepID=B9SLF4_RICCO 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 1, putative 1.934e-08
Complete
sp_v3.0_unigene28078 SustainPine v3.0 865
AutoFact: pfam02704, GASA, Gibberellin regulated protein 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 1, putative 3.743e-17
Complete
sp_v3.0_unigene29568 SustainPine v3.0 967
AutoFact: Gibberellin-regulated protein 2 n=1 Tax=Arabidopsis thaliana RepID=GASA2_ARATH 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 2 8.894e-25
Complete
sp_v3.0_unigene29598 SustainPine v3.0 1120
AutoFact: Tryp_alpha_amyl multi-domain protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cortical cell-delineating protein 1.512e-23
Putative Complete
sp_v3.0_unigene30031 SustainPine v3.0 734
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin-regulated protein 1, putative 6.725e-18
Putative Complete
sp_v3.0_unigene34163 SustainPine v3.0 1321
AutoFact: Cytochrome c oxidase subunit Vb n=1 Tax=Oryza sativa Japonica Group RepID=P92683_ORYSJ 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34190 SustainPine v3.0 930
AutoFact: pfam02704, GASA, Gibberellin regulated protein 4.0e-28
FL-Next: sp=Snakin-2; Solanum tuberosum (Potato). 0.0
Sma3: Gibberellin-regulated protein 1, putative 8.615e-13
Complete
sp_v3.0_unigene34752 SustainPine v3.0 1118
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-24
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Sma3: 14 kDa proline-rich protein DC2.15, putative 2.71e-28
Complete
sp_v3.0_unigene34930 SustainPine v3.0 1004
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene35684 SustainPine v3.0 1862
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene37234 SustainPine v3.0 611
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Marchantia polymorpha RepID=Q7XZE8_MARPO 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyltransferase, putative 7.168e-37
C-terminus
sp_v3.0_unigene37770 SustainPine v3.0 1485
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene37808 SustainPine v3.0 1032
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyltransferase, putative 2.67228e-42
Internal
sp_v3.0_unigene41380 SustainPine v3.0 125
AutoFact: Cellulose synthase-like D3-1, glycosyltransferase family 2 protein n=2 Tax=Selaginella moellendorffii RepID=D8R581_SELML 1.0e-16
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 3.79752e-43
Internal
sp_v3.0_unigene42716 SustainPine v3.0 571
AutoFact: cellulose synthase-like protein D4 [Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 1.96182e-44
Putative C-terminus
sp_v3.0_unigene46101 SustainPine v3.0 1219
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-ketoacyl-coa synthase family protein 1.45735e-43
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain