Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L6, conserved site

Term: IPR002358  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7117 SustainPine v3.0 5290
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBX9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Fip1 motif containing protein 7.797e-06
Putative Complete
sp_v3.0_unigene17759 SustainPine v3.0 1243
• AutoFact: large subunit ribosomal protein L6 [Arabidopsis thaliana] gb|AAK73258.1| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAD15497.2| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAM66004.1| putative ribosomal protein L6 [Arabidopsis tha 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr4 scaffold_32, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene30137 SustainPine v3.0 1200
• AutoFact: 50S ribosomal protein L6 [Arabidopsis thaliana] sp|O23049.1|RK6_ARATH RecName: Full=50S ribosomal protein L6, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2394; Flags: Precursor pdb|3BBO|I Chain I, Homology Model For The Spinach Chloroplast 50s S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene123844 SustainPine v3.0 445
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBX9_RICCO 6.0e-22
• FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene132341 SustainPine v3.0 318
• AutoFact: large subunit ribosomal protein L6 [Arabidopsis thaliana] gb|AAK73258.1| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAD15497.2| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAM66004.1| putative ribosomal protein L6 [Arabidopsis tha 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ribosomal protein L6 1.091e-08
Putative N-terminus
sp_v3.0_unigene156878 SustainPine v3.0 187
• AutoFact: 50S ribosomal protein L6 n=1 Tax=Flavobacterium johnsoniae UW101 RepID=RL6_FLAJ1 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158054 SustainPine v3.0 378
• AutoFact: 50S ribosomal protein L6 n=1 Tax=Flavobacterium johnsoniae UW101 RepID=RL6_FLAJ1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L6, chloroplastic 3.657e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain