Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Predicted AT-hook DNA-binding

Term: IPR014476  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene179 SustainPine v3.0 2001
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 8.063e-23
Complete
sp_v3.0_unigene408 SustainPine v3.0 725
• AutoFact: DUF296 domain containing protein 3.0e-06
• Sma3: ESC, putative 2.502e-08
coding
sp_v3.0_unigene2133 SustainPine v3.0 1744
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-hook DNA-binding protein 8.451e-18
Complete
sp_v3.0_unigene2244 SustainPine v3.0 1708
• AutoFact: DUF296 domain containing protein 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 4.289e-29
Complete
sp_v3.0_unigene10685 SustainPine v3.0 930
• AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9RDE5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 7.494e-23
Complete
sp_v3.0_unigene11629 SustainPine v3.0 1811
• AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 1.152e-22
Putative Complete
sp_v3.0_unigene11896 SustainPine v3.0 2016
• AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-hook protein 1 4.517e-18
Complete
sp_v3.0_unigene17560 SustainPine v3.0 1210
• AutoFact: AT-hook DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR79_CATRO 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23340 SustainPine v3.0 880
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ESC, putative 2.932e-15
C-terminus
sp_v3.0_unigene23968 SustainPine v3.0 1596
• AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 1.033e-20
Complete
sp_v3.0_unigene32211 SustainPine v3.0 1082
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
• FL-Next: tr=AT-hook DNA-binding protein; Catharanthus roseus (Madagascar periwinkle) (Vinca rosea). 0.0
• Sma3: DNA-binding protein-like 1.414e-19
Complete
sp_v3.0_unigene36070 SustainPine v3.0 909
• AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-hook DNA-binding protein 6.453e-18
C-terminus
sp_v3.0_unigene40663 SustainPine v3.0 1535
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 4.918e-29
Complete
sp_v3.0_unigene42348 SustainPine v3.0 940
• AutoFact: DUF296 domain containing protein 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 3.543e-29
N-terminus
sp_v3.0_unigene44442 SustainPine v3.0 1003
• AutoFact: DUF296 domain containing protein 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-hook DNA-binding protein 1.664e-11
Putative C-terminus
sp_v3.0_unigene49451 SustainPine v3.0 1044
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 6.77e-26
N-terminus
sp_v3.0_unigene50242 SustainPine v3.0 1382
• AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9SDZ0_RICCO 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-hook DNA-binding protein 8.55e-10
Putative Complete
sp_v3.0_unigene56173 SustainPine v3.0 492
• AutoFact: ESC, putative 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative DNA-binding protein 7.601e-07
Internal
sp_v3.0_unigene65977 SustainPine v3.0 336
• AutoFact: DNA-binding protein n=1 Tax=Zea mays RepID=B6TYB6_MAIZE 5.0e-05
• FL-Next: tr=DNA-binding protein; Zea mays (Maize). 0.0
• Sma3: DNA-binding protein-like 6.269e-20
Internal
sp_v3.0_unigene66558 SustainPine v3.0 476
• AutoFact: AT-hook motif nuclear-localized protein 19 [Arabidopsis thaliana] gb|AAF04888.1|AC011437_3 hypothetical protein [Arabidopsis thaliana] gb|AAM62794.1| putative DNA-binding protein [Arabidopsis thaliana] gb|AAO64817.1| At3g04570 [Arabidopsis thaliana] dbj|B 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain