Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 3'-5' exonuclease domain

Term: IPR002562  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene160 SustainPine v3.0 1573
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1510 SustainPine v3.0 1089
AutoFact: Werner Syndrome-like exonuclease [Arabidopsis thaliana] sp|Q84LH3.1|WEX_ARATH RecName: Full=Werner Syndrome-like exonuclease gb|AAO33765.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana] gb|AAR24686.1| At4g13870 [Arabidopsis thaliana] gb|AEE83339 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene1950 SustainPine v3.0 2057
AutoFact: DNA polymerase n=2 Tax=Nicotiana tabacum RepID=Q3LHS9_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative PolI-like DNA polymerase 2.668e-08
C-terminus
sp_v3.0_unigene3324 SustainPine v3.0 1120
AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene3989 SustainPine v3.0 1333
AutoFact: 3'-5' exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SDW9_RICCO 0.0
FL-Next: tr=3'-5' exonuclease, putative; Ricinus communis (Castor bean). 0.0
Sma3: RRP6-like protein 3 9.747e-06
C-terminus
sp_v3.0_unigene6225 SustainPine v3.0 2742
AutoFact: PA domain containing protein 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vacuolar-sorting receptor 1 1.039e-07
Putative Complete
sp_v3.0_unigene8612 SustainPine v3.0 1367
AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene14157 SustainPine v3.0 3918
AutoFact: Exosome complex exonuclease RRP6 n=3 Tax=Arabidopsis RepID=A9LLI7_ARATH 0.0
FL-Next: tr=Putative nucleolar protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative nucleolar protein 7.335e-08
Complete
sp_v3.0_unigene14437 SustainPine v3.0 543
AutoFact: 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana] gb|AAP21257.1| At5g24340 [Arabidopsis thaliana] dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana] gb|AED93295.1| 3' 2.0e-21
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene14542 SustainPine v3.0 743
AutoFact: DNA polymerase A family protein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C6J5_ARATH 0.0
FL-Next: tr=At1g50840/F8A12_8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: PolI-like DNA polymerase 2.505e-08
Internal
sp_v3.0_unigene15861 SustainPine v3.0 1334
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene16042 SustainPine v3.0 1446
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16726 SustainPine v3.0 791
AutoFact: DUF82 domain containing protein 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene34071 SustainPine v3.0 1875
AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene40332 SustainPine v3.0 465
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene43091 SustainPine v3.0 225
AutoFact: DNA polymerase n=2 Tax=Nicotiana tabacum RepID=Q3LHS9_TOBAC 1.0e-24
FL-Next: tr=DNA polymerase; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative PolI-like DNA polymerase 1.195e-08
Internal
sp_v3.0_unigene43284 SustainPine v3.0 189
AutoFact: DNA polymerase A family protein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C6J5_ARATH 1.0e-16
FL-Next: tr=DNA polymerase A family protein, putative; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative PolI-like DNA polymerase 1.745e-08
Internal
sp_v3.0_unigene44436 SustainPine v3.0 529
AutoFact: Polymyositis/scleroderma autoantigen 2-like n=1 Tax=Oryza sativa Japonica Group RepID=Q69RB5_ORYSJ 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene44471 SustainPine v3.0 721
AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 5.0e-40
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene48224 SustainPine v3.0 818
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain