Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RWD domain

Term: IPR006575  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene63777 SustainPine v3.0 298
AutoFact: putative ATP-dependent RNA helicase [Oryza sativa Japonica Group] 5.0e-17
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73970 SustainPine v3.0 294
AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001985AA9 9.00054e-42
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.276e-18
Internal
sp_v3.0_unigene80058 SustainPine v3.0 180
AutoFact: putative helicase [Oryza sativa Japonica Group] 2.0e-24
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative RNA helicase A 3.02e-11
Internal
sp_v3.0_unigene102098 SustainPine v3.0 615
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.728e-16
Putative N-terminus
sp_v3.0_unigene107002 SustainPine v3.0 270
AutoFact: GCN2-type protein kinase n=1 Tax=Triticum aestivum RepID=F4NAR5_WHEAT 8.0e-25
FL-Next: sp=Probable serine/threonine-protein kinase GCN2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene107134 SustainPine v3.0 356
AutoFact: Eif2alpha kinase, putative n=1 Tax=Ricinus communis RepID=B9T5C5_RICCO 2.0e-38
FL-Next: sp=Probable serine/threonine-protein kinase GCN2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene108514 SustainPine v3.0 427
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene120908 SustainPine v3.0 237
AutoFact: protein kinase like [Arabidopsis thaliana] 6.0e-18
FL-Next: sp=Probable serine/threonine-protein kinase GCN2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121886 SustainPine v3.0 549
AutoFact: Eif2alpha kinase, putative n=1 Tax=Ricinus communis RepID=B9T5C5_RICCO 0.0
FL-Next: tr=Mitogen activated protein kinase 13; Pinus taeda (Loblolly pine). 0.0
Internal
sp_v3.0_unigene124070 SustainPine v3.0 236
AutoFact: MRNA splicing factor ATP-dependent RNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01DF3_OSTTA 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene148818 SustainPine v3.0 174
AutoFact: mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL52650.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene155374 SustainPine v3.0 596
AutoFact: Helicase domain-containing protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CAN8_9EUKA 1.00053e-42
FL-Next: tr=mRNA splicing factor ATP-dependent RNA helicase (ISS); Ostreococcus tauri. 0.0
C-terminus
sp_v3.0_unigene159577 SustainPine v3.0 479
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.361e-18
Internal
sp_v3.0_unigene160173 SustainPine v3.0 428
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 2.0e-36
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MRNA splicing factor ATP-dependent RNA helicase (ISS) 2.525e-11
Internal
sp_v3.0_unigene161070 SustainPine v3.0 389
AutoFact: putative helicase [Oryza sativa Japonica Group] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.571e-14
Putative N-terminus
sp_v3.0_unigene163408 SustainPine v3.0 407
AutoFact: ATP-dependent RNA helicase (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBQ6_CUCME 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.112e-31
Internal
sp_v3.0_unigene168174 SustainPine v3.0 278
AutoFact: PREDICTED: similar to IMPACT [Gallus gallus] 1.0e-24
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene199229 SustainPine v3.0 549
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 5.04467e-44
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.971e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain