Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: G-patch domain

Term: IPR000467  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene258 SustainPine v3.0 3223
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 2.852e-10
Complete
sp_v3.0_unigene1556 SustainPine v3.0 2117
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene2096 SustainPine v3.0 2167
AutoFact: Diphthamide biosynthesis protein 1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT0_PHYPA 0.0
FL-Next: sp=Diphthamide biosynthesis protein 1; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene3093 SustainPine v3.0 1584
AutoFact: tuftelin-interacting protein 11 [Arabidopsis thaliana] gb|AAD50023.1|AC007651_18 Similar to tuftelin-interacting protein [Arabidopsis thaliana] gb|AEE29537.1| tuftelin-interacting protein 11 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene3249 SustainPine v3.0 1155
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Complete
sp_v3.0_unigene3838 SustainPine v3.0 1846
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene4865 SustainPine v3.0 603
AutoFact: Diphthamide biosynthesis protein 1 n=3 Tax=Arabidopsis RepID=Q9FIT5_ARATH 8.0e-25
FL-Next: tr=Diphthamide biosynthesis protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene6039 SustainPine v3.0 1838
AutoFact: DNA-damage repair protein drt111, putative n=1 Tax=Ricinus communis RepID=B9SB37_RICCO 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Splicing factor 45 4.622e-09
Complete
sp_v3.0_unigene6193 SustainPine v3.0 2999
AutoFact: dynamin like protein 2a [Arabidopsis thaliana] 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dynamin, putative 2.572e-10
Complete
sp_v3.0_unigene6478 SustainPine v3.0 1093
AutoFact: D111/G-patch; Zinc finger, C2H2-type n=1 Tax=Medicago truncatula RepID=Q2HRQ8_MEDTR 7.0e-32
FL-Next: tr=RNA-binding protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus
sp_v3.0_unigene6955 SustainPine v3.0 1893
AutoFact: Pin2-interacting protein x1, putative n=1 Tax=Ricinus communis RepID=B9T7Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10809 SustainPine v3.0 1007
AutoFact: D111/G-patch domain-containing protein [Arabidopsis thaliana] emb|CAB67619.1| putative protein [Arabidopsis thaliana] gb|AAT06459.1| At3g57910 [Arabidopsis thaliana] dbj|BAD95245.1| putative protein [Arabidopsis thaliana] gb|AEE79716.1| D111/G-patch domai 2.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene11317 SustainPine v3.0 508
AutoFact: tuftelin-interacting protein 11 [Arabidopsis thaliana] gb|AAD50023.1|AC007651_18 Similar to tuftelin-interacting protein [Arabidopsis thaliana] gb|AEE29537.1| tuftelin-interacting protein 11 [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene13198 SustainPine v3.0 2122
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Splicing factor 4-like protein 1.818e-09
Complete
sp_v3.0_unigene13354 SustainPine v3.0 2959
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13361 SustainPine v3.0 1697
AutoFact: D111/G-patch; Zinc finger, C2H2-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene14103 SustainPine v3.0 1195
AutoFact: Dynamin central region; Dynamin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 1.975e-24
N-terminus
sp_v3.0_unigene18702 SustainPine v3.0 471
AutoFact: D111/G-patch domain-containing protein [Arabidopsis thaliana] emb|CAB67619.1| putative protein [Arabidopsis thaliana] gb|AAT06459.1| At3g57910 [Arabidopsis thaliana] dbj|BAD95245.1| putative protein [Arabidopsis thaliana] gb|AEE79716.1| D111/G-patch domai 4.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene21484 SustainPine v3.0 579
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene22123 SustainPine v3.0 3848
AutoFact: pfam00665, rve, Integrase core domain 1.0e-21
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain