Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: G-patch domain

Term: IPR000467  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24552 SustainPine v3.0 548
AutoFact: Ferritin n=1 Tax=Branchiostoma belcheri tsingtauense RepID=Q6WNW7_BRABE 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Putative C-terminus
sp_v3.0_unigene24966 SustainPine v3.0 1348
AutoFact: Protein MOS2 n=2 Tax=Arabidopsis RepID=MOS2_ARATH 9.0e-38
FL-Next: sp=Protein MOS2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene27126 SustainPine v3.0 1211
AutoFact: D111/G-patch domain-containing protein n=4 Tax=Arabidopsis RepID=Q8GXG0_ARATH 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein 6.264e-07
Complete
sp_v3.0_unigene29637 SustainPine v3.0 539
AutoFact: tuftelin-interacting-like protein [Arabidopsis thaliana] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene37815 SustainPine v3.0 1392
putative_coding
sp_v3.0_unigene38509 SustainPine v3.0 4356
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.102e-30
Complete
sp_v3.0_unigene38543 SustainPine v3.0 3872
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.407e-20
Putative Complete
sp_v3.0_unigene38609 SustainPine v3.0 1914
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene38613 SustainPine v3.0 3443
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.368e-07
Putative Complete
sp_v3.0_unigene39442 SustainPine v3.0 568
AutoFact: tuftelin-interacting protein 11 [Arabidopsis thaliana] gb|AAD50023.1|AC007651_18 Similar to tuftelin-interacting protein [Arabidopsis thaliana] gb|AEE29537.1| tuftelin-interacting protein 11 [Arabidopsis thaliana] 4.0e-34
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene44485 SustainPine v3.0 624
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene45897 SustainPine v3.0 1089
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.246e-14
Putative Complete
sp_v3.0_unigene45898 SustainPine v3.0 1536
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.98e-26
Putative Complete
sp_v3.0_unigene46139 SustainPine v3.0 351
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 6.0e-31
FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.45e-25
Internal
sp_v3.0_unigene48442 SustainPine v3.0 236
AutoFact: Dynamin central region; Dynamin [Medicago truncatula] 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phragmoplastin 3.604e-11
Internal
sp_v3.0_unigene49266 SustainPine v3.0 430
AutoFact: tuftelin-interacting protein 11 [Arabidopsis thaliana] gb|AAD50023.1|AC007651_18 Similar to tuftelin-interacting protein [Arabidopsis thaliana] gb|AEE29537.1| tuftelin-interacting protein 11 [Arabidopsis thaliana] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene51290 SustainPine v3.0 134
AutoFact: putative protein phosphatase 2C 15 [Arabidopsis thaliana] ref|NP_001031252.1| putative protein phosphatase 2C 15 [Arabidopsis thaliana] sp|Q9M9C6.1|P2C15_ARATH RecName: Full=Probable protein phosphatase 2C 15; Short=AtPP2C15 gb|AAF26041.1|AC015986_4 putat 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase, putative 2.16e-11
Internal
sp_v3.0_unigene51577 SustainPine v3.0 701
AutoFact: RVT_1 domain containing protein 3.0e-10
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene51932 SustainPine v3.0 335
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 2.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.81e-15
Putative N-terminus
sp_v3.0_unigene52162 SustainPine v3.0 223
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 3.0e-20
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 1.039e-08
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain