Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Extracellular solute-binding protein, family 3, conserved site

Term: IPR018313  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene99083 SustainPine v3.0 287
AutoFact: Cellulose synthase A catalytic subunit 3 [UDP-forming] n=4 Tax=Brassicaceae RepID=CESA3_ARATH 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene99604 SustainPine v3.0 1183
AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene101290 SustainPine v3.0 781
AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
FL-Next: tr=Translation elongation factor EF-1 alpha; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102379 SustainPine v3.0 445
AutoFact: cellulose synthase-like protein B4 [Arabidopsis thaliana] sp|O80891.1|CSLB4_ARATH RecName: Full=Cellulose synthase-like protein B4; Short=AtCslB4 gb|AAC25936.1| putative cellulose synthase [Arabidopsis thaliana] gb|AEC08698.1| cellulose synthase-like prot 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene103408 SustainPine v3.0 419
AutoFact: Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] emb|CAB71880.1| putative protein [Arabidopsis thaliana] gb|AEE80322.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Emb|CAB71880.1 2.076e-08
Putative N-terminus
sp_v3.0_unigene104592 SustainPine v3.0 687
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-19
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104728 SustainPine v3.0 441
AutoFact: protein dicer-like 3 [Arabidopsis thaliana] emb|CAB88120.1| putative protein [Arabidopsis thaliana] gb|ABF19799.1| dicer-like 3 [Arabidopsis thaliana] gb|AEE77842.1| protein dicer-like 3 [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104875 SustainPine v3.0 707
AutoFact: Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] dbj|BAB09405.1| unnamed protein product [Arabidopsis thaliana] gb|AED91454.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] 2.0e-21
FL-Next: tr=Os12g0162900 protein; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene105720 SustainPine v3.0 484
AutoFact: RNA ligase [Arabidopsis thaliana] ref|NP_001154320.1| RNA ligase [Arabidopsis thaliana] dbj|BAF02126.1| translation elongation factor EF-1 alpha [Arabidopsis thaliana] gb|AEE28210.1| RNA ligase [Arabidopsis thaliana] gb|AEE28211.1| RNA ligase [Arabidopsis 4.0e-37
FL-Next: tr=RNA ligase isoform; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: RNA ligase isoform 3 5.586e-10
Internal
sp_v3.0_unigene106189 SustainPine v3.0 337
AutoFact: Dicer-like protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IKF4_POPTR 2.0e-17
FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 3 OS=Arabidopsis thaliana GN=DCL3 0.0
Sma3: Dicer-like 3 7.997e-09
Internal
sp_v3.0_unigene109933 SustainPine v3.0 449
AutoFact: dicer-like protein 4 [Arabidopsis thaliana] sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4 gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana] gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana] 1.0e-23
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Dicer-like protein 3.366e-07
Internal
sp_v3.0_unigene110161 SustainPine v3.0 351
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-39
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene113995 SustainPine v3.0 424
AutoFact: dicer-like protein [Oryza sativa Indica Group] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene119615 SustainPine v3.0 526
AutoFact: RecName: Full=Cellulose synthase-like protein E6; AltName: Full=OsCslE6 dbj|BAD46391.1| putative cellulose synthase-like protein OsCslE1 [Oryza sativa Japonica Group] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 1.747e-23
Internal
sp_v3.0_unigene122547 SustainPine v3.0 351
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 3.0e-34
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Dicer-like protein 7.796e-10
Internal
sp_v3.0_unigene124969 SustainPine v3.0 560
AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene127828 SustainPine v3.0 749
AutoFact: plasma membrane protein 3 [Leymus chinensis] 8.0e-15
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Stress-induced hydrophobic peptide 1.716e-27
Complete
sp_v3.0_unigene130746 SustainPine v3.0 507
AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 1.4013e-45
Internal
sp_v3.0_unigene140033 SustainPine v3.0 289
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAD94053.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01838.1| hypothetical protein [Arabidopsis thaliana] gb|AED91551.1| MSCS-like 2 protein [Arabidopsis thaliana] 2.0e-16
FL-Next: Isoform 3 of Mechanosensitive ion channel protein 2, chloroplastic OS=Arabidopsis thaliana GN=MSL2 0.0
Internal
sp_v3.0_unigene141043 SustainPine v3.0 605
AutoFact: Cold induced plasma membrane protein n=5 Tax=rosids RepID=D3GBZ9_9ROSI 2.0e-12
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plasma membrane protein 3 3.006e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain