Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Translocon-associated beta

Term: IPR008856  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9693 SustainPine v3.0 1206
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene11851 SustainPine v3.0 1120
AutoFact: Translocon-associated protein beta family protein-like n=1 Tax=Solanum tuberosum RepID=Q2VCI0_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene45039 SustainPine v3.0 254
AutoFact: DNA excision repair protein E n=2 Tax=Arabidopsis RepID=Q9ZV43_ARATH 1.0e-35
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene48117 SustainPine v3.0 386
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59772 SustainPine v3.0 384
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Internal
sp_v3.0_unigene64878 SustainPine v3.0 146
AutoFact: DNA repair and recombination protein RAD26, putative n=1 Tax=Ricinus communis RepID=B9SV29_RICCO 1.0e-16
FL-Next: tr=DNA repair and recombination protein RAD26, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene73703 SustainPine v3.0 470
AutoFact: RecName: Full=Helicase SWR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene76619 SustainPine v3.0 321
AutoFact: RAD26-like SNF2 family DNA-dependent ATPase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q2_LACBS 1.0e-24
FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
Sma3: SNF2 super family 3.206e-32
Putative C-terminus
sp_v3.0_unigene79858 SustainPine v3.0 129
AutoFact: DNA excision repair protein E [Arabidopsis thaliana] gb|AAD08945.1| putative SNF2/RAD54 family DNA repair and recombination protein [Arabidopsis thaliana] gb|AEC06805.1| DNA excision repair protein E [Arabidopsis thaliana] 8.0e-14
FL-Next: tr=Putative RAD26; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene99227 SustainPine v3.0 694
AutoFact: DNA excision repair protein E [Arabidopsis thaliana] gb|AAD08945.1| putative SNF2/RAD54 family DNA repair and recombination protein [Arabidopsis thaliana] gb|AEC06805.1| DNA excision repair protein E [Arabidopsis thaliana] 2.94273e-44
FL-Next: sp=Putative chromatin-remodeling complex ATPase chain; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104491 SustainPine v3.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene126873 SustainPine v3.0 723
AutoFact: translocon-associated protein subunit beta [Arabidopsis thaliana] ref|NP_001119221.1| translocon-associated protein subunit beta [Arabidopsis thaliana] ref|NP_001119222.1| translocon-associated protein subunit beta [Arabidopsis thaliana] ref|NP_001119223. 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translocon-associated protein beta containing protein 1.696e-09
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain