Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Peptide chain release factor 1

Term: IPR004373  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3110 SustainPine v3.0 2203
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Complete
sp_v3.0_unigene4252 SustainPine v3.0 559
AutoFact: Pectinesterase n=1 Tax=Taiwania cryptomerioides RepID=B7SIX2_9CONI 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene7151 SustainPine v3.0 1883
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene7352 SustainPine v3.0 2277
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Complete
sp_v3.0_unigene8654 SustainPine v3.0 1721
AutoFact: Peptide chain release factor 1 [Arabidopsis thaliana] gb|AAL90914.1| AT3g62910/T20O10_10 [Arabidopsis thaliana] gb|AAM78045.1| AT3g62910/T20O10_10 [Arabidopsis thaliana] dbj|BAC82693.1| Chloroplast Release Factor 1 [Arabidopsis thaliana] gb|AEE80410.1| Pe 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr7 scaffold_31, whole genome shotgun sequence 0.0
Putative Complete
sp_v3.0_unigene8665 SustainPine v3.0 1790
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9SAU4_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene9904 SustainPine v3.0 1252
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene10200 SustainPine v3.0 1756
AutoFact: Peptide chain release factor 1 [Arabidopsis thaliana] gb|ABN04796.1| At2g47020 [Arabidopsis thaliana] gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=At2g47020; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative peptide chain release factor 2.005e-12
C-terminus
sp_v3.0_unigene10668 SustainPine v3.0 1396
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PST8_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene11511 SustainPine v3.0 1496
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9SAU4_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene12136 SustainPine v3.0 1661
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene17078 SustainPine v3.0 1836
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Complete
sp_v3.0_unigene18854 SustainPine v3.0 1281
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene27517 SustainPine v3.0 1593
AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene28434 SustainPine v3.0 382
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene34261 SustainPine v3.0 731
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene37824 SustainPine v3.0 1811
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PST8_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene74822 SustainPine v3.0 405
AutoFact: peptide chain release factor 1 n=1 Tax=Pseudomonas syringae pv. syringae FF5 RepID=UPI0001CC1E3A 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene74942 SustainPine v3.0 233
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 5.0e-21
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Putative C-terminus
sp_v3.0_unigene76541 SustainPine v3.0 199
AutoFact: Pectinesterase n=2 Tax=Solanum tuberosum RepID=E8ZG61_SOLTU 6.0e-27
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain