Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Domain of unknown function DUF221

Term: IPR003864  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene58900 SustainPine v3.0 403
AutoFact: Putative pentatricopeptide repeat protein n=5 Tax=Malvoideae RepID=B2ZAT1_9ROSI 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 7.618e-18
Internal
sp_v3.0_unigene58907 SustainPine v3.0 410
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.962e-11
Internal
sp_v3.0_unigene59107 SustainPine v3.0 342
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group] 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 5.382e-14
C-terminus
sp_v3.0_unigene59624 SustainPine v3.0 448
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.4013e-45
C-terminus
sp_v3.0_unigene60089 SustainPine v3.0 380
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 9.097e-15
Internal
sp_v3.0_unigene60415 SustainPine v3.0 435
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.709e-14
Internal
sp_v3.0_unigene61112 SustainPine v3.0 186
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb01g027810; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene61771 SustainPine v3.0 293
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 8.356e-20
Internal
sp_v3.0_unigene62191 SustainPine v3.0 317
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.06e-11
Internal
sp_v3.0_unigene62553 SustainPine v3.0 183
AutoFact: PREDICTED: DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Acyrthosiphon pisum RepID=UPI00017918AB 3.0e-23
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Pinus densiflora (Japanese red pine). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 6.759e-31
Internal
sp_v3.0_unigene63040 SustainPine v3.0 243
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06140, mitochondrial; Flags: Precursor gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.108e-14
Internal
sp_v3.0_unigene63120 SustainPine v3.0 190
AutoFact: Ankyrin; Pentatricopeptide repeat [Medicago truncatula] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EMB2261 putative 1.658e-09
Internal
sp_v3.0_unigene63370 SustainPine v3.0 246
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 2.703e-09
C-terminus
sp_v3.0_unigene63455 SustainPine v3.0 263
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63584 SustainPine v3.0 168
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300 gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63698 SustainPine v3.0 236
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.372e-14
C-terminus
sp_v3.0_unigene63762 SustainPine v3.0 229
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.359e-14
Internal
sp_v3.0_unigene63990 SustainPine v3.0 180
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Lepidogyna hodgsoniae RepID=B3U1Z4_9MARC 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene64591 SustainPine v3.0 250
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49170, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2261; Flags: Precursor gb|AAW62962.1| emb 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 1.472e-12
Internal
sp_v3.0_unigene64922 SustainPine v3.0 279
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q2HUK9_MEDTR 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 1.595e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain