Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Agenet

Term: IPR008395  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene90 SustainPine v3.0 923
• AutoFact: T31J12.4 n=1 Tax=Arabidopsis thaliana RepID=Q9ZPZ3_ARATH 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene340 SustainPine v3.0 5840
• AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 2.792e-14
Putative Complete
sp_v3.0_unigene1875 SustainPine v3.0 5252
• AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 0.0
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromatin remodeling complex subunit 1.086e-16
Complete
sp_v3.0_unigene2419 SustainPine v3.0 651
• AutoFact: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] gb|AAM91530.1| unknown protein [Arabidopsis thaliana] gb|AAP37755.1| At1g68580 [Arabidopsis thaliana] gb|AEE34814.1| agenet domain-containing 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene2538 SustainPine v3.0 965
• AutoFact: putative PHD finger transcription factor [Arabidopsis thaliana] gb|AED97076.1| putative PHD finger transcription factor [Arabidopsis thaliana] 4.0e-24
• FL-Next: tr=Chromodomain helicase-DNA-binding protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative C-terminus
sp_v3.0_unigene2849 SustainPine v3.0 1875
• AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3601 SustainPine v3.0 1865
• AutoFact: chromatin remodeling 5 [Arabidopsis thaliana] gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 6.666e-34
Putative Complete
sp_v3.0_unigene3677 SustainPine v3.0 1723
• AutoFact: Agenet multi-domain protein 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene3943 SustainPine v3.0 2470
• AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4554 SustainPine v3.0 1340
• AutoFact: putative agenet domain-containing protein [Oryza sativa Japonica Group] dbj|BAD38428.1| putative agenet domain-containing protein [Oryza sativa Japonica Group] gb|EAZ22156.1| hypothetical protein OsJ_05817 [Oryza sativa Japonica Group] dbj|BAG91727.1| unn 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5607 SustainPine v3.0 1536
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene6815 SustainPine v3.0 3561
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S9Q9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7319 SustainPine v3.0 1200
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZV5_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8114 SustainPine v3.0 3123
• AutoFact: putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Oryza sativa Japonica Group] dbj|BAD32028.1| putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Oryza sa 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Complete
sp_v3.0_unigene10247 SustainPine v3.0 1082
• AutoFact: pfam03735, ENT, ENT domain 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene11906 SustainPine v3.0 688
• AutoFact: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] ref|NP_001119443.1| agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] ref|NP_ 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene16712 SustainPine v3.0 1181
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZV5_RICCO 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18715 SustainPine v3.0 658
• AutoFact: Unassigned protein 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21946 SustainPine v3.0 442
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZV5_RICCO 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene29272 SustainPine v3.0 729
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 1.359e-29
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain