Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C6HC-type

Term: IPR002867  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene97269 SustainPine v3.0 1305
AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.094e-34
Internal
sp_v3.0_unigene98748 SustainPine v3.0 421
AutoFact: IBR domain containing protein [Arabidopsis thaliana] emb|CAB75476.1| putative protein [Arabidopsis thaliana] gb|AEE78034.1| IBR domain containing protein [Arabidopsis thaliana] 8.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene102069 SustainPine v3.0 1045
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB67676.1| putative protein [Arabidopsis thaliana] gb|AAM61020.1| unknown [Arabidopsis thaliana] gb|AEE79128.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene107041 SustainPine v3.0 597
AutoFact: abscisic acid receptor PYL7 [Arabidopsis thaliana] sp|Q1ECF1.1|PYL7_ARATH RecName: Full=Abscisic acid receptor PYL7; AltName: Full=ABI1-binding protein 7; AltName: Full=PYR1-like protein 7; AltName: Full=Regulatory components of ABA receptor 2 gb|ABF83673 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 3.277e-12
N-terminus
sp_v3.0_unigene108514 SustainPine v3.0 427
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene110041 SustainPine v3.0 473
AutoFact: helicase , IBR and zinc finger protein domain-containing protein [Arabidopsis thaliana] gb|AED91533.1| helicase , IBR and zinc finger protein domain-containing protein [Arabidopsis thaliana] 7.0e-38
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.852e-21
Internal
sp_v3.0_unigene112282 SustainPine v3.0 317
AutoFact: ATP-dependent RNA helicase, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 8.99998e-41
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.012e-24
Internal
sp_v3.0_unigene117241 SustainPine v3.0 295
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 3.0e-26
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene119909 SustainPine v3.0 325
AutoFact: Streptomyces cyclase/dehydrase family protein [Brassica oleracea] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 3.593e-16
Internal
sp_v3.0_unigene123250 SustainPine v3.0 352
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 1.0e-26
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene125753 SustainPine v3.0 396
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 1.0e-27
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.412e-06
Internal
sp_v3.0_unigene130321 SustainPine v3.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene131645 SustainPine v3.0 221
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Streptomyces cyclase/dehydrase family protein 8.439e-09
Internal
sp_v3.0_unigene142425 SustainPine v3.0 566
AutoFact: Os08g0451800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5A1_ORYSJ 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-protein ligase/ zinc ion binding protein 4.663e-10
C-terminus
sp_v3.0_unigene157656 SustainPine v3.0 528
AutoFact: Ubiquitin-conjugating enzyme E2-binding protein 1 n=1 Tax=Ectocarpus siliculosus RepID=D8LCD0_ECTSI 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene160894 SustainPine v3.0 436
AutoFact: Abscisic acid receptor PYL7 n=3 Tax=Brassicaceae RepID=PYL7_ARATH 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bet v I allergen-like 8.988e-18
Internal
sp_v3.0_unigene163408 SustainPine v3.0 407
AutoFact: ATP-dependent RNA helicase (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBQ6_CUCME 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.112e-31
Internal
sp_v3.0_unigene167804 SustainPine v3.0 194
AutoFact: IBR domain containing protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene185638 SustainPine v3.0 474
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 4.418e-16
C-terminus
sp_v3.0_unigene196280 SustainPine v3.0 119
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Primula vulgaris] 4.0e-11
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain