Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Choline transporter-like

Term: IPR007603  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1614 SustainPine v3.0 2058
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T979_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene4129 SustainPine v3.0 2415
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AAL24390.1| putative protein [Arabidopsis thaliana] gb|AAM47987.1| putative protein [Arabidopsis thaliana] gb|AEE86957.1| Plasma-membrane choline transporter family protein [Arab 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein F20M13.200 2.665e-10
Complete
sp_v3.0_unigene4343 SustainPine v3.0 2630
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Choline transporter like family 5.539e-08
Complete
sp_v3.0_unigene5979 SustainPine v3.0 2845
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6581 SustainPine v3.0 2105
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T395_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13490 SustainPine v3.0 1155
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T395_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gd2b, putative 1.318e-09
C-terminus
sp_v3.0_unigene14259 SustainPine v3.0 684
AutoFact: Protein PNS1, putative n=1 Tax=Ricinus communis RepID=B9ST27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59233 SustainPine v3.0 223
AutoFact: Unassigned protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64076 SustainPine v3.0 308
AutoFact: Choline transporter-like protein n=2 Tax=Oryza sativa RepID=Q6EP45_ORYSJ 3.0e-18
FL-Next: tr=Choline transporter-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene65065 SustainPine v3.0 164
AutoFact: Choline transporter-like protein n=2 Tax=Oryza sativa RepID=Q6EP45_ORYSJ 4.0e-14
FL-Next: tr=Choline transporter-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene68319 SustainPine v3.0 185
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T979_VITVI 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene73936 SustainPine v3.0 398
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AAL24390.1| putative protein [Arabidopsis thaliana] gb|AAM47987.1| putative protein [Arabidopsis thaliana] gb|AEE86957.1| Plasma-membrane choline transporter family protein [Arab 8.0e-28
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein F20M13.200 1.929e-10
Internal
sp_v3.0_unigene75842 SustainPine v3.0 201
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene80533 SustainPine v3.0 322
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AAL24390.1| putative protein [Arabidopsis thaliana] gb|AAM47987.1| putative protein [Arabidopsis thaliana] gb|AEE86957.1| Plasma-membrane choline transporter family protein [Arab 6.0e-27
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein F20M13.200 1.929e-10
Internal
sp_v3.0_unigene102351 SustainPine v3.0 428
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T979_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene140996 SustainPine v3.0 410
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AED91938.1| Plasma-membrane choline transporter family protein [Arabidopsis thaliana] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143028 SustainPine v3.0 320
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T395_VITVI 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein P0018C07.126 8.772e-06
C-terminus
sp_v3.0_unigene157218 SustainPine v3.0 383
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AAL24390.1| putative protein [Arabidopsis thaliana] gb|AAM47987.1| putative protein [Arabidopsis thaliana] gb|AEE86957.1| Plasma-membrane choline transporter family protein [Arab 2.0e-29
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein F20M13.200 1.929e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain