Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA recombination and repair protein Rad51, C-terminal

Term: IPR013632  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene6159 SustainPine v3.0 1715
• AutoFact: DNA repair protein RAD51 homolog n=1 Tax=Solanum lycopersicum RepID=RAD51_SOLLC 0.0
• FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: DNA repair protein RAD51 homolog 0.0
Complete
sp_v3.0_unigene24521 SustainPine v3.0 524
• AutoFact: PREDICTED: similar to DNA repair protein RAD51 homolog A n=1 Tax=Hydra magnipapillata RepID=UPI0001923F2B 0.0
• FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Meiotic recombination protein DMC1 homolog 6.709e-12
Internal
sp_v3.0_unigene40266 SustainPine v3.0 400
• AutoFact: RecA bacterial DNA recombination protein [Medicago truncatula] 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA repair protein radA (RadA)-like 2.399e-09
Internal
sp_v3.0_unigene54134 SustainPine v3.0 357
• AutoFact: DNA repair protein RAD51-like 2 [Arabidopsis thaliana] gb|AEC08140.1| DNA repair protein RAD51-like 2 [Arabidopsis thaliana] 1.0e-21
• FL-Next: sp=DNA repair protein RAD51 homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene64811 SustainPine v3.0 256
• AutoFact: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative (EC:2.1.1.127) 6.0e-16
• FL-Next: tr=[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Putative uncharacterized protein At2g18850 5.819e-10
Internal
sp_v3.0_unigene67374 SustainPine v3.0 237
• AutoFact: DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAD45123.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAG91035.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAD51C protein 3.006e-09
Internal
sp_v3.0_unigene67971 SustainPine v3.0 206
• AutoFact: DNA repair protein rad51, putative n=1 Tax=Ricinus communis RepID=B9RR28_RICCO 2.0e-18
• FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Rad51 DNA recombinase 1 1.208e-08
Putative C-terminus
sp_v3.0_unigene68699 SustainPine v3.0 236
• AutoFact: Meiotic recombination protein DMC1 homolog n=1 Tax=Glycine max RepID=DMC1_SOYBN 3.0e-20
• FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Meiotic recombination protein DMC1 homolog 3.125e-12
C-terminus
sp_v3.0_unigene70764 SustainPine v3.0 251
• AutoFact: DNA repair and recombination protein radA, putative n=1 Tax=Ricinus communis RepID=B9RDA0_RICCO 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene99949 SustainPine v3.0 877
• AutoFact: RAD51 homolog [Populus nigra] 0.0
• FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Meiotic recombination protein DMC1 homolog 7.576e-12
C-terminus
sp_v3.0_unigene108617 SustainPine v3.0 444
• AutoFact: DNA repair protein XRCC3-like protein [Arabidopsis thaliana] ref|NP_851202.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana] sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA repair protein XRCC3 homolog; AltName: Full=X-ray repair cross-complementi 1.0e-24
• FL-Next: sp=DNA repair protein XRCC3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene116541 SustainPine v3.0 549
• AutoFact: SET domain-containing protein [Arabidopsis thaliana] gb|AAV85712.1| At2g18850 [Arabidopsis thaliana] gb|AEC06813.1| SET domain-containing protein [Arabidopsis thaliana] 1.0e-33
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Putative C-terminus
sp_v3.0_unigene116733 SustainPine v3.0 367
• AutoFact: RecA bacterial DNA recombination protein [Medicago truncatula] 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene156027 SustainPine v3.0 258
• AutoFact: DNA repair protein RAD51 homolog 1 n=16 Tax=Amniota RepID=RAD51_MOUSE 1.0e-30
• FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Meiotic recombination protein DMC1 homolog 1.491e-11
Internal
sp_v3.0_unigene157049 SustainPine v3.0 418
• AutoFact: PREDICTED: similar to RAD51 homolog isoform 1 n=1 Tax=Ciona intestinalis RepID=UPI000180BB1E 0.0
• FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Meiotic recombination protein DMC1 homolog 7.079e-12
Internal
sp_v3.0_unigene160014 SustainPine v3.0 334
• AutoFact: DNA repair protein RAD51-like 2 [Arabidopsis thaliana] gb|AEC08140.1| DNA repair protein RAD51-like 2 [Arabidopsis thaliana] 3.0e-19
• FL-Next: sp=DNA repair protein RAD51 homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene194960 SustainPine v3.0 516
• AutoFact: DNA repair protein RAD51-like 3 [Arabidopsis thaliana] sp|Q8GXF0.2|RA51C_ARATH RecName: Full=DNA repair protein RAD51 homolog 3; AltName: Full=DNA repair-recombination protein RAD51C; Short=AtRAD51C emb|CAC14294.1| Rad51C protein [Arabidopsis thaliana] db 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rad51 DNA recombinase 3 4.556e-09
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain