Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA polymerase sigma-70 region 2

Term: IPR007627  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene5980 SustainPine v3.0 2229
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9582 SustainPine v3.0 2223
• AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12697 SustainPine v3.0 956
• AutoFact: sigma factor [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid RNA polymerase sigma factor 2.532e-11
Internal
sp_v3.0_unigene22621 SustainPine v3.0 938
• AutoFact: sigma factorB [Arabidopsis thaliana] 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sigma factor 2.447e-08
C-terminus
sp_v3.0_unigene34975 SustainPine v3.0 758
• AutoFact: RNA polymerase sigma factor n=2 Tax=Cyanothece RepID=B7K1V2_CYAP8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sigma factor 2 2.424e-08
Putative C-terminus
sp_v3.0_unigene105611 SustainPine v3.0 529
• AutoFact: Plastid RNA polymerase sigma-subunit n=7 Tax=Arabidopsis RepID=O22057_ARATH 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene158590 SustainPine v3.0 370
• AutoFact: RNA polymerase sigma factor rpoS n=10 Tax=Pseudomonas RepID=RPOS_PSEAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA polymerase sigma factor 8.307e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain