Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: RNA-processing protein, HAT helix

Term: IPR003107  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene112413 SustainPine v3.0 305
AutoFact: Plant RNA cleavage stimulation factor, putative n=1 Tax=Ricinus communis RepID=B9S078_RICCO 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene113900 SustainPine v3.0 224
AutoFact: Unassigned protein
FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: TPR Domain containing protein, expressed 4.598e-07
Internal
sp_v3.0_unigene117281 SustainPine v3.0 182
AutoFact: XPA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9S614_RICCO 1.0e-24
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene127421 SustainPine v3.0 609
AutoFact: pre-mRNA-processing factor 39 [Arabidopsis thaliana] gb|AAL07170.1| unknown protein [Arabidopsis thaliana] gb|AAM14126.1| unknown protein [Arabidopsis thaliana] gb|AAM65430.1| unknown [Arabidopsis thaliana] gb|AEE27652.1| pre-mRNA-processing factor 39 [Ar 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene127671 SustainPine v3.0 449
AutoFact: DUF946 domain containing protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene129054 SustainPine v3.0 361
AutoFact: DUF946 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene129728 SustainPine v3.0 624
AutoFact: pre-mRNA-processing factor 39 [Arabidopsis thaliana] gb|AAL07170.1| unknown protein [Arabidopsis thaliana] gb|AAM14126.1| unknown protein [Arabidopsis thaliana] gb|AAM65430.1| unknown [Arabidopsis thaliana] gb|AEE27652.1| pre-mRNA-processing factor 39 [Ar 7.0e-22
FL-Next: tr=Pre-mRNA-processing factor; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene131456 SustainPine v3.0 543
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene137639 SustainPine v3.0 370
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene138152 SustainPine v3.0 218
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Putative uncharacterized protein OJ1611_C08.15 6.823e-06
Internal
sp_v3.0_unigene138654 SustainPine v3.0 280
AutoFact: XPA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9S614_RICCO 2.0e-34
FL-Next: tr=XPA-binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene140555 SustainPine v3.0 824
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene140924 SustainPine v3.0 522
AutoFact: pre-mRNA-processing factor 39 [Arabidopsis thaliana] gb|AAL07170.1| unknown protein [Arabidopsis thaliana] gb|AAM14126.1| unknown protein [Arabidopsis thaliana] gb|AAM65430.1| unknown [Arabidopsis thaliana] gb|AEE27652.1| pre-mRNA-processing factor 39 [Ar 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene144489 SustainPine v3.0 516
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene144766 SustainPine v3.0 751
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene144980 SustainPine v3.0 1161
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR domain protein 3.433e-08
Putative Complete
sp_v3.0_unigene150029 SustainPine v3.0 245
AutoFact: Unassigned protein
FL-Next: tr=Squamous cell carcinoma antigen recognized by T-cells, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene150784 SustainPine v3.0 432
AutoFact: Tetratricopeptide repeat protein 21B putative n=1 Tax=Albugo laibachii Nc14 RepID=F0VYT9_9STRA 2.0e-38
FL-Next: tr=Tetratricopeptide repeat protein 21B putative; Albugo laibachii Nc14. 0.0
C-terminus
sp_v3.0_unigene151398 SustainPine v3.0 275
AutoFact: Pre-mRNA-splicing factor SYF1-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NGB5_PHYIT 2.0e-16
FL-Next: tr=Uncharacterized protein; Phytophthora ramorum (Sudden oak death agent). 0.0
Internal
sp_v3.0_unigene156483 SustainPine v3.0 419
AutoFact: putative pre-rRNA processing protein, 5' partial [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain