Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, Sec23/Sec24-type

Term: IPR006895  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3948 SustainPine v3.0 2211
AutoFact: protein transport protein SEC23 [Arabidopsis thaliana] dbj|BAB02785.1| protein transport protein Sec23 [Arabidopsis thaliana] gb|AAO22730.1| putative transport protein [Arabidopsis thaliana] gb|AAO50656.1| putative transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Protein transport protein sec23, putative 5.891e-11
C-terminus
sp_v3.0_unigene5631 SustainPine v3.0 2903
AutoFact: protein transport protein SEC23 [Arabidopsis thaliana] dbj|BAB02785.1| protein transport protein Sec23 [Arabidopsis thaliana] gb|AAO22730.1| putative transport protein [Arabidopsis thaliana] gb|AAO50656.1| putative transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Sma3: Chromosome undetermined scaffold_144, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene6021 SustainPine v3.0 2667
AutoFact: sec23/sec24 transport family protein [Arabidopsis thaliana] gb|AAD15598.1| expressed protein [Arabidopsis thaliana] gb|AAK96686.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56782.1| At2g27460 [Arabidopsis thaliana] gb|AEC07999.1| sec23/sec24 transport 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_87, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene8854 SustainPine v3.0 4352
AutoFact: transport protein sec24-like CEF [Arabidopsis thaliana] gb|AEE77893.1| transport protein sec24-like CEF [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein transport protein Sec24-like CEF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein transport protein Sec24C, putative 1.725e-08
Complete
sp_v3.0_unigene12028 SustainPine v3.0 1913
AutoFact: protein transport factor-like protein [Oryza sativa Japonica Group] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13745 SustainPine v3.0 1420
AutoFact: transport protein sec24-like CEF [Arabidopsis thaliana] gb|AEE77893.1| transport protein sec24-like CEF [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein transport protein Sec24C, putative 1.262e-08
Complete
sp_v3.0_unigene14033 SustainPine v3.0 3104
AutoFact: sec23/sec24-like transport protein [Arabidopsis thaliana] gb|AAO29951.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56793.1| At5g43670 [Arabidopsis thaliana] gb|AED94993.1| sec23/sec24-like transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Protein transport protein sec23, putative 5.997e-11
Complete
sp_v3.0_unigene21033 SustainPine v3.0 3815
AutoFact: sec23/sec24-like transport protein [Arabidopsis thaliana] gb|AAO22561.1| putative protein transport factor [Arabidopsis thaliana] gb|AEE82080.1| sec23/sec24-like transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_42, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene34211 SustainPine v3.0 875
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Protein transport protein sec23, putative 5.786e-11
Internal
sp_v3.0_unigene34701 SustainPine v3.0 940
AutoFact: sec23/sec24 transport family protein [Arabidopsis thaliana] gb|AAD15598.1| expressed protein [Arabidopsis thaliana] gb|AAK96686.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56782.1| At2g27460 [Arabidopsis thaliana] gb|AEC07999.1| sec23/sec24 transport 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene37919 SustainPine v3.0 629
AutoFact: Collagen multi-domain protein 4.0e-11
coding
sp_v3.0_unigene40186 SustainPine v3.0 536
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein transport protein sec23, putative 2.251e-11
N-terminus
sp_v3.0_unigene54628 SustainPine v3.0 357
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9RN42_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene63062 SustainPine v3.0 118
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64512 SustainPine v3.0 149
AutoFact: putative Sec24-like COPII protein [Arabidopsis thaliana] 8.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene67084 SustainPine v3.0 238
AutoFact: Protein transport protein Sec24-like CEF n=4 Tax=Arabidopsis RepID=SC24C_ARATH 3.0e-11
FL-Next: sp=Protein transport protein Sec24-like CEF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75002 SustainPine v3.0 87
AutoFact: transport protein sec24-like CEF [Arabidopsis thaliana] gb|AEE77894.1| transport protein sec24-like CEF [Arabidopsis thaliana] 3.0e-06
FL-Next: sp=Protein transport protein Sec24-like CEF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79442 SustainPine v3.0 300
AutoFact: Protein transport protein Sec24C, putative n=1 Tax=Ricinus communis RepID=B9RJ34_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein transport protein Sec24C, putative 3.155e-08
Internal
sp_v3.0_unigene96655 SustainPine v3.0 425
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 2.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene97507 SustainPine v3.0 321
AutoFact: sec23/sec24-like transport protein [Arabidopsis thaliana] gb|AAO29951.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56793.1| At5g43670 [Arabidopsis thaliana] gb|AED94993.1| sec23/sec24-like transport protein [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain