Sustainpine_db
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Name: Rab-GTPase-TBC domain

Term: IPR000195  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene165871 SustainPine v3.0 202
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AAM65402.1| putative plant adhesion molecule [Arabidopsis thaliana] dbj|BAF00593.1| putative plant adhesion molecule [Arabidopsis thaliana] gb|ABN04838.1| At3g02460 [Arabidopsis thaliana] gb|A 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene182975 SustainPine v3.0 662
AutoFact: RabGAP/TBC domain-containing protein n=5 Tax=Arabidopsis RepID=F4JF82_ARATH 3.0e-09
FL-Next: tr=AT3g55020/T15C9_20; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Run and tbc1 domain containing 3, plant, putative 1.39e-09
Putative N-terminus
sp_v3.0_unigene183065 SustainPine v3.0 646
AutoFact: LSM domain-containing protein n=1 Tax=Glomerella graminicola M1.001 RepID=E3QWF0_COLGM 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein f, putative 6.229e-09
Complete
sp_v3.0_unigene185464 SustainPine v3.0 367
AutoFact: Microtubule-associated protein n=1 Tax=Nicotiana benthamiana RepID=E1U7Y5_NICBE 2.0e-11
FL-Next: tr=Microtubule-associated protein; Nicotiana benthamiana. 0.0
C-terminus
sp_v3.0_unigene189625 SustainPine v3.0 602
AutoFact: Small nuclear ribonucleoprotein F n=3 Tax=Pleosporineae RepID=B2VQW0_PYRTR 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene201671 SustainPine v3.0 503
AutoFact: Putative copper-transporting ATPase 3 n=13 Tax=Camelineae RepID=AHM7_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 2.189e-23
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain