Sustainpine_db
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Name: Rab-GTPase-TBC domain

Term: IPR000195  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene35884 SustainPine v3.0 655
AutoFact: LSM domain-containing protein n=1 Tax=Glomerella graminicola M1.001 RepID=E3QWF0_COLGM 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene40678 SustainPine v3.0 1686
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB43670.1| putative protein [Arabidopsis thaliana] emb|CAB79753.1| putative protein [Arabidopsis thaliana] gb|AAL66975.1| unknown protein [Arabidopsis thaliana] gb|AAM20178.1| unknown protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene43378 SustainPine v3.0 221
AutoFact: RabGAP/TBC domain-containing protein-like [Oryza sativa Japonica Group] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Run and tbc1 domain containing 3, plant, putative 2.594e-09
Internal
sp_v3.0_unigene44322 SustainPine v3.0 1159
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB43670.1| putative protein [Arabidopsis thaliana] emb|CAB79753.1| putative protein [Arabidopsis thaliana] gb|AAL66975.1| unknown protein [Arabidopsis thaliana] gb|AAM20178.1| unknown protei 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene45041 SustainPine v3.0 329
AutoFact: RabGAP/TBC domain-containing protein n=5 Tax=Arabidopsis RepID=F4JPG6_ARATH 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene47457 SustainPine v3.0 127
AutoFact: RabGAP/TBC domain-containing protein-like n=2 Tax=Oryza sativa RepID=Q5QMF8_ORYSJ 1.0e-08
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene48314 SustainPine v3.0 301
AutoFact: putative GTPase-activating protein [Oryza sativa Japonica Group] dbj|BAE79746.1| putative GTPase-activating protein [Oryza sativa Japonica Group] gb|EEC69756.1| hypothetical protein OsI_00002 [Oryza sativa Indica Group] gb|EEE53688.1| hypothetical protein 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene49047 SustainPine v3.0 239
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AEE79329.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 1.0e-16
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Run and tbc1 domain containing 3, plant, putative 7.852e-10
Internal
sp_v3.0_unigene52404 SustainPine v3.0 352
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB43670.1| putative protein [Arabidopsis thaliana] emb|CAB79753.1| putative protein [Arabidopsis thaliana] gb|AAL66975.1| unknown protein [Arabidopsis thaliana] gb|AAM20178.1| unknown protei 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene54776 SustainPine v3.0 331
AutoFact: Sm snRNP core protein Smf1 n=1 Tax=Coccidioides posadasii str. Silveira RepID=E9D5W6_COCPS 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein f, putative 6.229e-09
Complete
sp_v3.0_unigene55812 SustainPine v3.0 275
AutoFact: pfam00566, TBC, TBC domain 1.0e-05
FL-Next: tr=Putative GTPase-activating protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene59125 SustainPine v3.0 168
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AAK43888.1|AF370511_1 Unknown protein [Arabidopsis thaliana] gb|AAC02742.2| expressed protein [Arabidopsis thaliana] gb|AAM91215.1| unknown protein [Arabidopsis thaliana] gb|AEC08431.1| RabGAP 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene63071 SustainPine v3.0 173
AutoFact: RAB GTPase activator 6.0e-09
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene67979 SustainPine v3.0 145
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AEE79329.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 4.0e-08
FL-Next: tr=Run and tbc1 domain containing 3, plant, putative; Ricinus communis (Castor bean). 0.0
Sma3: Os01g0835000 protein 9.26e-06
Internal
sp_v3.0_unigene73052 SustainPine v3.0 182
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78873 SustainPine v3.0 479
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 1.0e-06
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene79077 SustainPine v3.0 355
AutoFact: TBC1 domain family member 13 protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PL46_9MYCE 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene79552 SustainPine v3.0 261
AutoFact: tbc1 domain family protein [Cryptococcus neoformans var. neoformans JEC21] gb|AAW46137.1| tbc1 domain family protein, putative [Cryptococcus neoformans var. neoformans JEC21] 8.0e-29
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Internal
sp_v3.0_unigene81287 SustainPine v3.0 252
AutoFact: Heavy metal translocating P-type ATPase n=2 Tax=Acidovorax RepID=A1W200_ACISJ 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 1.583e-23
Internal
sp_v3.0_unigene81522 SustainPine v3.0 98
AutoFact: pfam00566, TBC, TBC domain 3.0e-05
FL-Next: tr=Putative GTPase-activating protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain