Sustainpine_db
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Name: Rab-GTPase-TBC domain

Term: IPR000195  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1344 SustainPine v3.0 2002
AutoFact: putative GTPase-activating protein [Oryza sativa Japonica Group] dbj|BAE79746.1| putative GTPase-activating protein [Oryza sativa Japonica Group] gb|EEC69756.1| hypothetical protein OsI_00002 [Oryza sativa Indica Group] gb|EEE53688.1| hypothetical protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative GTPase activating protein 3.591e-08
C-terminus
sp_v3.0_unigene1962 SustainPine v3.0 1373
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AAM65402.1| putative plant adhesion molecule [Arabidopsis thaliana] dbj|BAF00593.1| putative plant adhesion molecule [Arabidopsis thaliana] gb|ABN04838.1| At3g02460 [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene1981 SustainPine v3.0 2906
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2600 SustainPine v3.0 3507
AutoFact: Run and tbc1 domain containing 3, plant, putative n=1 Tax=Ricinus communis RepID=B9SGD5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Run and tbc1 domain containing 3, plant, putative 2.9e-09
Complete
sp_v3.0_unigene5586 SustainPine v3.0 2197
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AAK43888.1|AF370511_1 Unknown protein [Arabidopsis thaliana] gb|AAC02742.2| expressed protein [Arabidopsis thaliana] gb|AAM91215.1| unknown protein [Arabidopsis thaliana] gb|AEC08431.1| RabGAP 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5591 SustainPine v3.0 2300
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_36, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5820 SustainPine v3.0 2174
AutoFact: Ric1 rop-interactive CRIB motif-containing protein RIC1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S3U2_PHYPA 0.0
FL-Next: tr=Ric1 rop-interactive CRIB motif-containing protein RIC1; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene6215 SustainPine v3.0 1515
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAE99001.1| hypothetical protein [Arabidopsis thaliana] gb|AED96540.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At4g27100 1.612e-08
N-terminus
sp_v3.0_unigene6324 SustainPine v3.0 2164
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAD44199.1| GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] gb|AED94745.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene10316 SustainPine v3.0 1740
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RabGAP/TBC protein 3.841e-12
Complete
sp_v3.0_unigene10967 SustainPine v3.0 811
AutoFact: RAB GTPase activator 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein At4g27100 3.335e-09
C-terminus
sp_v3.0_unigene11502 SustainPine v3.0 1980
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12560 SustainPine v3.0 2624
AutoFact: TBC1 domain family member 15 [Pongo abelii] emb|CAH89546.1| hypothetical protein [Pongo abelii] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13973 SustainPine v3.0 1541
AutoFact: RabGAP/TBC domain-containing protein-like [Oryza sativa Japonica Group] 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Run and tbc1 domain containing 3, plant, putative 1.318e-09
C-terminus
sp_v3.0_unigene14346 SustainPine v3.0 1099
AutoFact: Heavy metal ATPase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GZT4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 3.047e-12
Internal
sp_v3.0_unigene14905 SustainPine v3.0 548
AutoFact: Os05g0465100 protein n=2 Tax=Oryza sativa RepID=Q6I5K0_ORYSJ 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Run and tbc1 domain containing 3, plant, putative 2.924e-06
N-terminus
sp_v3.0_unigene15086 SustainPine v3.0 1231
AutoFact: Copper P1B-ATPase n=2 Tax=Glycine max RepID=A7ISW5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 2.026e-11
C-terminus
sp_v3.0_unigene23288 SustainPine v3.0 2580
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB43670.1| putative protein [Arabidopsis thaliana] emb|CAB79753.1| putative protein [Arabidopsis thaliana] gb|AAL66975.1| unknown protein [Arabidopsis thaliana] gb|AAM20178.1| unknown protei 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Populus trichocarpa x Populus deltoides. 0.0
C-terminus
sp_v3.0_unigene25425 SustainPine v3.0 442
AutoFact: putative potential copper-transporting ATPase [Oryza sativa Japonica Group] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: p-type ATPase superfamily 2.799e-08
Putative Complete
sp_v3.0_unigene33166 SustainPine v3.0 904
AutoFact: small nuclear ribonucleoprotein F [Arabidopsis thaliana] ref|XP_002867361.1| hypothetical protein ARALYDRAFT_913456 [Arabidopsis lyrata subsp. lyrata] ref|XP_002885912.1| hypothetical protein ARALYDRAFT_899645 [Arabidopsis lyrata subsp. lyrata] sp|Q9SUM2. 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein f, putative 7.34e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain