Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Coatomer, WD associated region

Term: IPR006692  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1743 SustainPine v3.0 3585
AutoFact: coatomer complex subunit [Brachypodium sylvaticum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer beta subunit, putative 2.155e-11
Complete
sp_v3.0_unigene5561 SustainPine v3.0 4957
AutoFact: coatomer subunit alpha-1 [Arabidopsis thaliana] sp|Q94A40.2|COPA1_ARATH RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1 gb|AAC28519.1| Strong similarity to coatamer alpha subunit (HEPCOP) homolog gb|U24105 fro 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_840, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene8850 SustainPine v3.0 3822
AutoFact: coatomer subunit alpha-2 [Arabidopsis thaliana] sp|Q9SJT9.1|COPA2_ARATH RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2 gb|AAD23699.1| coatomer alpha subunit [Arabidopsis thaliana] dbj|BAF00596.1| coatomer alp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit alpha-2 3.002e-08
C-terminus
sp_v3.0_unigene11712 SustainPine v3.0 4413
AutoFact: coatomer subunit beta'-2 [Arabidopsis thaliana] sp|Q9C827.1|COB22_ARATH RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 gb|AAG51545.1|AC037424_10 coatomer complex subunit, putative; 33791-27676 [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18355 SustainPine v3.0 1200
AutoFact: coatomer subunit beta'-2 [Arabidopsis thaliana] sp|Q9C827.1|COB22_ARATH RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 gb|AAG51545.1|AC037424_10 coatomer complex subunit, putative; 33791-27676 [Arabidopsis th 0.0
FL-Next: sp=Coatomer subunit beta'-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit beta'-2 1.712e-08
C-terminus
sp_v3.0_unigene19391 SustainPine v3.0 478
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 4.0e-20
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene37027 SustainPine v3.0 878
AutoFact: coatomer subunit alpha-1 [Arabidopsis thaliana] sp|Q94A40.2|COPA1_ARATH RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1 gb|AAC28519.1| Strong similarity to coatamer alpha subunit (HEPCOP) homolog gb|U24105 fro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit alpha-2 2.516e-08
Putative N-terminus
sp_v3.0_unigene50195 SustainPine v3.0 434
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 1.0e-24
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer alpha subunit, putative 4.17e-09
C-terminus
sp_v3.0_unigene51865 SustainPine v3.0 377
AutoFact: Coatomer subunit alpha-2 n=4 Tax=Arabidopsis RepID=COPA2_ARATH 8.0e-22
FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer alpha subunit, putative 4.891e-09
Internal
sp_v3.0_unigene60475 SustainPine v3.0 456
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 1.0e-14
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
N-terminus
sp_v3.0_unigene60782 SustainPine v3.0 223
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 8.0e-09
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61066 SustainPine v3.0 182
AutoFact: coatomer subunit alpha-2 [Arabidopsis thaliana] sp|Q9SJT9.1|COPA2_ARATH RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2 gb|AAD23699.1| coatomer alpha subunit [Arabidopsis thaliana] dbj|BAF00596.1| coatomer alp 1.0e-19
FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 2.409e-08
Internal
sp_v3.0_unigene63898 SustainPine v3.0 179
AutoFact: Alpha-COP n=1 Tax=Chlamydomonas reinhardtii RepID=A8HRR9_CHLRE 1.0e-26
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Putative N-terminus
sp_v3.0_unigene63912 SustainPine v3.0 136
AutoFact: Vesicle coat complex COPI, alpha subunit n=1 Tax=Ectocarpus siliculosus RepID=D8LL95_ECTSI 2.0e-17
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Internal
sp_v3.0_unigene64247 SustainPine v3.0 184
AutoFact: COP alpha homolog (Fragment) n=1 Tax=Triticum aestivum RepID=Q9FVJ9_WHEAT 8.0e-06
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene64924 SustainPine v3.0 116
AutoFact: Coatomer protein complex subunit beta 2 (Fragment) n=1 Tax=Medicago sativa RepID=Q45NL8_MEDSA 4.0e-10
FL-Next: sp=Coatomer subunit beta'-1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Coatomer subunit beta'-2 2.868e-08
Internal
sp_v3.0_unigene69775 SustainPine v3.0 199
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 3.0e-26
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Internal
sp_v3.0_unigene75171 SustainPine v3.0 307
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Internal
sp_v3.0_unigene77798 SustainPine v3.0 284
AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_15 n=1 Tax=Blastocystis hominis RepID=D8M1K8_BLAHO 1.0e-07
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Coatomer alpha subunit, putative 4.823e-09
Internal
sp_v3.0_unigene80668 SustainPine v3.0 139
AutoFact: Coatomer protein complex n=1 Tax=Micromonas sp. RCC299 RepID=C1E4N8_MICSR 1.0e-15
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain