Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene14428 SustainPine v3.0 250
AutoFact: Xylulose 5-phosphate/phosphate translocator, chloroplastic n=2 Tax=Arabidopsis RepID=XPT_ARATH 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14434 SustainPine v3.0 1315
AutoFact: lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9XID3.1|Y1343_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Flags: Precursor gb|AAD39605.1|AC007454_4 Contains similarity to gi|479356 protein kin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 2.38e-17
C-terminus
sp_v3.0_unigene14706 SustainPine v3.0 317
AutoFact: anaphase-promoting complex subunit 1 [Arabidopsis thaliana] sp|Q9FFF9.1|APC1_ARATH RecName: Full=Anaphase-promoting complex subunit 1; AltName: Full=Cyclosome subunit 1; AltName: Full=Protein EMBRYO DEFECTIVE 2771 dbj|BAB11545.1| meiotic check point regul 3.0e-28
FL-Next: sp=Anaphase-promoting complex subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene14928 SustainPine v3.0 314
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 1.159e-27
Internal
sp_v3.0_unigene15589 SustainPine v3.0 1022
AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|O04086.1|Y1105_ARATH RecName: Full=Probable receptor-like protein kinase At1g11050; Flags: Precursor gb|AAB65477.1| Ser/Thr protein kinase isolog; 46094-44217 [Arabidopsis thaliana] gb|AEE286 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 3.036e-13
Complete
sp_v3.0_unigene15764 SustainPine v3.0 1196
AutoFact: SHR5-receptor-like kinase [Saccharum hybrid cultivar SP70-1143] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 5.483e-13
Putative C-terminus
sp_v3.0_unigene15890 SustainPine v3.0 1638
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9IAE8_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 4.38e-19
Putative N-terminus
sp_v3.0_unigene15951 SustainPine v3.0 683
AutoFact: BRASSINOSTEROID INSENSITIVE 1, putative n=1 Tax=Ricinus communis RepID=B9RWP3_RICCO 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 7.576e-30
C-terminus
sp_v3.0_unigene16170 SustainPine v3.0 1240
AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GQ39_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl:coa ligase 4.048e-38
C-terminus
sp_v3.0_unigene16261 SustainPine v3.0 1473
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene16321 SustainPine v3.0 697
AutoFact: RecName: Full=Glutamate receptor 3.1; AltName: Full=Ligand-gated ion channel 3.1; Flags: Precursor emb|CAE03759.1| OSJNBa0013K16.8 [Oryza sativa Japonica Group] gb|ABC33859.1| putative glutamate receptor-like channel 3.1 [Oryza sativa Japonica Group] gb|E 0.0
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 6.915e-19
Internal
sp_v3.0_unigene16544 SustainPine v3.0 4359
AutoFact: ATP-binding cassette transporter, subfamily B, member 18, group MDR/PGP protein PpABCB18 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU14_PHYPA 0.0
FL-Next: sp=ABC transporter B family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 2.66247e-44
Complete
sp_v3.0_unigene16731 SustainPine v3.0 1631
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 1.062e-27
C-terminus
sp_v3.0_unigene16814 SustainPine v3.0 981
AutoFact: SHR5-receptor-like kinase [Saccharum hybrid cultivar SP70-1143] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 1.028e-14
Putative C-terminus
sp_v3.0_unigene18374 SustainPine v3.0 704
AutoFact: Nucleotide/sugar transporter family protein [Arabidopsis thaliana] sp|Q9LF61.1|XPT_ARATH RecName: Full=Xylulose 5-phosphate/phosphate translocator, chloroplastic; Short=Xul-5-P/phosphate translocator; Flags: Precursor emb|CAC01907.1| glucose 6 phosphate/p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-6-phosphate/phosphate-translocator 4.506e-11
C-terminus
sp_v3.0_unigene18773 SustainPine v3.0 2079
AutoFact: putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] sp|Q9ZUI0.1|Y2241_ARATH RecName: Full=Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130; Flags: Precursor gb|AAD03374.1| putative receptor- 0.0
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Serine-threonine protein kinase, plant-type, putative 1.7e-12
Putative C-terminus
sp_v3.0_unigene18880 SustainPine v3.0 928
AutoFact: putative phosphopantothenoylcysteine decarboxylase [Arabidopsis thaliana] sp|P94063.2|HAL3B_ARATH RecName: Full=Probable phosphopantothenoylcysteine decarboxylase; AltName: Full=Halotolerance protein Hal3b; Short=AtHal3b gb|AAB53106.1| HAL3B protein [Arab 0.0
FL-Next: sp=Probable phosphopantothenoylcysteine decarboxylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphopantothenoylcysteine decarboxylase 1.039e-17
Putative Complete
sp_v3.0_unigene19071 SustainPine v3.0 854
AutoFact: receptor-like protein kinase HAIKU2 [Arabidopsis thaliana] sp|Q9LJM4.1|IKU2_ARATH RecName: Full=Receptor-like protein kinase HAIKU2; Flags: Precursor dbj|BAB02557.1| receptor-like protein kinase [Arabidopsis thaliana] gb|AEE76277.1| receptor-like protein 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 3.696e-14
Internal
sp_v3.0_unigene19083 SustainPine v3.0 810
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 5.163e-14
C-terminus
sp_v3.0_unigene19226 SustainPine v3.0 2521
AutoFact: root uracil permease 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Purine permease, putative 6.359e-29
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain