Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11184 SustainPine v3.0 1477
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene11285 SustainPine v3.0 1886
AutoFact: subtilisin-like serine proteinase, putative [Musa acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylem serine proteinase 1, putative 0.0
C-terminus
sp_v3.0_unigene11343 SustainPine v3.0 1297
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 6.0e-26
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 7.707e-22
C-terminus
sp_v3.0_unigene11576 SustainPine v3.0 1444
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RR38_SELML 0.0
FL-Next: tr=ABC transporter B family member; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Complete
sp_v3.0_unigene11625 SustainPine v3.0 538
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene11658 SustainPine v3.0 1758
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 9.828e-20
Putative N-terminus
sp_v3.0_unigene11823 SustainPine v3.0 1116
AutoFact: receptor-like protein kinase 1 [Glycine max] 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 4.47e-14
N-terminus
sp_v3.0_unigene12234 SustainPine v3.0 630
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.139e-07
Internal
sp_v3.0_unigene12289 SustainPine v3.0 2267
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12369 SustainPine v3.0 672
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene12476 SustainPine v3.0 3200
AutoFact: glutamate receptor 3.3 [Arabidopsis thaliana] sp|Q9C8E7.1|GLR33_ARATH RecName: Full=Glutamate receptor 3.3; AltName: Full=Ligand-gated ion channel 3.3; Flags: Precursor gb|AAG51316.1|AC025815_3 ligand-gated ion channel, putative [Arabidopsis thaliana] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Putative Complete
sp_v3.0_unigene12703 SustainPine v3.0 1714
AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9R6R5_RICCO 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 2.61e-29
Putative C-terminus
sp_v3.0_unigene12774 SustainPine v3.0 2072
AutoFact: Subtilisin-like protease n=2 Tax=Nicotiana tabacum RepID=A9XG40_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylem serine proteinase 1, putative 0.0
C-terminus
sp_v3.0_unigene13094 SustainPine v3.0 2306
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl:coa ligase 5.749e-36
Complete
sp_v3.0_unigene13248 SustainPine v3.0 1997
AutoFact: serine protease-like protein [Nicotiana tabacum] 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Xylem serine proteinase 1, putative 8.15556e-43
C-terminus
sp_v3.0_unigene13427 SustainPine v3.0 911
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9HPN5_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene13713 SustainPine v3.0 624
AutoFact: peptidase family-like protein [Oryza sativa Japonica Group] dbj|BAD32061.1| peptidase family-like protein [Oryza sativa Japonica Group] 1.0e-31
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene13750 SustainPine v3.0 1692
AutoFact: CjMDR1 n=1 Tax=Coptis japonica RepID=Q94IH6_COPJA 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene13836 SustainPine v3.0 3138
AutoFact: GDA1/CD39 nucleoside phosphatase-like protein [Arabidopsis thaliana] gb|AAC32915.2| putative nucleoside triphosphatase [Arabidopsis thaliana] gb|AEC05650.1| GDA1/CD39 nucleoside phosphatase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative nucleoside triphosphatase 2.484e-12
Complete
sp_v3.0_unigene14231 SustainPine v3.0 915
AutoFact: Leucine Rich Repeat family protein [Solanum demissum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.043e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain