Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7541 SustainPine v3.0 1448
• AutoFact: Unassigned protein
• FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33B; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: At2g26140-like protein 1.948e-08
C-terminus
sp_v3.0_unigene7718 SustainPine v3.0 1765
• AutoFact: Glycerate oxidase n=1 Tax=Pinus pinaster RepID=F4MKM3_PINPS 0.0
• FL-Next: tr=Glycerate oxidase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Glycolate oxidase 0.0
Complete
sp_v3.0_unigene8007 SustainPine v3.0 2033
• AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 1.467e-28
C-terminus
sp_v3.0_unigene8141 SustainPine v3.0 1629
• AutoFact: Os06g0130100 protein n=4 Tax=Oryza sativa RepID=Q7XB99_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 6.355e-12
Complete
sp_v3.0_unigene8177 SustainPine v3.0 1654
• AutoFact: 4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 2.838e-39
C-terminus
sp_v3.0_unigene8490 SustainPine v3.0 1053
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9RAJ6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 3.716e-38
C-terminus
sp_v3.0_unigene9006 SustainPine v3.0 355
• AutoFact: Unassigned protein
• FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene9152 SustainPine v3.0 486
• AutoFact: putative glutamate receptor ion channel [Arabidopsis thaliana] 0.0
• FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene9154 SustainPine v3.0 721
• AutoFact: receptor protein kinase, putative [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 1.313e-14
N-terminus
sp_v3.0_unigene9182 SustainPine v3.0 1281
• AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 0.0
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 1.90703e-41
C-terminus
sp_v3.0_unigene9647 SustainPine v3.0 436
• AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 1.0e-21
• FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Misassembled
sp_v3.0_unigene9659 SustainPine v3.0 1922
• AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycolate oxidase 0.0
Complete
sp_v3.0_unigene9825 SustainPine v3.0 1207
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.283e-38
C-terminus
sp_v3.0_unigene9972 SustainPine v3.0 1632
• AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene10065 SustainPine v3.0 1276
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 3.86e-38
C-terminus
sp_v3.0_unigene10163 SustainPine v3.0 657
• AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 3.0e-20
• FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33B; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene10360 SustainPine v3.0 2026
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene10564 SustainPine v3.0 2326
• AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 1.375e-21
C-terminus
sp_v3.0_unigene10753 SustainPine v3.0 1575
• AutoFact: Permease n=5 Tax=Poaceae RepID=B6U234_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleobase ascorbate transporter 1.6e-29
Putative N-terminus
sp_v3.0_unigene11009 SustainPine v3.0 1642
• AutoFact: Auxin influx carrier protein n=1 Tax=Zinnia violacea RepID=C0SU69_ZINEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin influx carrier component 2.607e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain