Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene194022 SustainPine v3.0 246
AutoFact: putative cucumisin-like serine protease [Oryza sativa Japonica Group] gb|AAP53584.1| Subtilisin N-terminal Region family protein, expressed [Oryza sativa Japonica Group] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylem serine proteinase 1, putative 8.939e-24
Internal
sp_v3.0_unigene195562 SustainPine v3.0 327
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 4-coumarate:CoA ligase 1.429e-35
Putative C-terminus
sp_v3.0_unigene196875 SustainPine v3.0 321
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9HPN5_POPTR 6.0e-20
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 5.517e-38
Internal
sp_v3.0_unigene197012 SustainPine v3.0 218
AutoFact: Putative receptor protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=Q8S3P8_ORYSJ 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.084e-12
Internal
sp_v3.0_unigene197147 SustainPine v3.0 412
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 8.622e-13
Internal
sp_v3.0_unigene197239 SustainPine v3.0 347
AutoFact: Putative germin-like protein 3-2 n=2 Tax=Oryza sativa RepID=GL32_ORYSJ 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 2.537e-29
C-terminus
sp_v3.0_unigene201400 SustainPine v3.0 710
AutoFact: Very similar to receptor-like serine/threonine kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 2.315e-13
Putative C-terminus
sp_v3.0_unigene205472 SustainPine v3.0 498
AutoFact: Ras-related protein Rab-5A n=2 Tax=Dictyostelium RepID=RAB5A_DICDI 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein RHN1 2.683e-13
Putative C-terminus
sp_v3.0_unigene206235 SustainPine v3.0 597
AutoFact: GTP binding protein [Cichorium intybus x Cichorium endivia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab5/RabF-family small GTPase 2.561e-10
N-terminus
sp_v3.0_unigene206577 SustainPine v3.0 538
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 3.28e-23
C-terminus
sp_v3.0_unigene206643 SustainPine v3.0 450
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 3.959e-14
C-terminus
sp_v3.0_unigene207681 SustainPine v3.0 2023
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.14e-31
C-terminus
sp_v3.0_unigene207786 SustainPine v3.0 550
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene207929 SustainPine v3.0 348
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AAG28814.1|AC079374_17 unknown protein [Arabidopsis thaliana] gb|AAL08297.1| At1g25320/F4F7_17 [Arabidopsis thaliana] gb|AAQ65094.1| At1g25320/F4F7_17 [Arabidopsis thaliana] gb|ACN5 1.0e-31
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.201e-12
Internal
sp_v3.0_unigene208234 SustainPine v3.0 272
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene210180 SustainPine v3.0 1014
AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GQ39_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl:coa ligase 4.574e-38
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain