Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127584 SustainPine v3.0 942
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 3.697e-38
Misassembled
sp_v3.0_unigene128031 SustainPine v3.0 833
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycolate oxidase 0.0
Internal
sp_v3.0_unigene128037 SustainPine v3.0 1021
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.608e-31
C-terminus
sp_v3.0_unigene128110 SustainPine v3.0 443
AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] dbj|BAD33650.1| putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] gb|EAZ44777.1| hypothetical protein OsJ_29408 [Oryza sativa Japonica Gr 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine-threonine protein kinase, plant-type, putative 4.122e-12
Internal
sp_v3.0_unigene128246 SustainPine v3.0 567
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycolate oxidase 0.0
Internal
sp_v3.0_unigene128396 SustainPine v3.0 450
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 2.944e-38
Internal
sp_v3.0_unigene130391 SustainPine v3.0 385
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycolate oxidase 1.383e-32
C-terminus
sp_v3.0_unigene130457 SustainPine v3.0 607
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl:coa ligase 4.164e-38
C-terminus
sp_v3.0_unigene130510 SustainPine v3.0 324
AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 2.0e-35
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 4.029e-23
Internal
sp_v3.0_unigene130590 SustainPine v3.0 137
AutoFact: CLV1-like LRR receptor kinase (Fragment) n=1 Tax=Musa acuminata subsp. malaccensis RepID=Q2PXX2_MUSAC 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 4.372e-29
Internal
sp_v3.0_unigene130752 SustainPine v3.0 249
AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 3.0e-19
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: E3 ubiquitin-protein ligase BRE1-like 2 2.613e-08
C-terminus
sp_v3.0_unigene131082 SustainPine v3.0 322
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.614e-19
Internal
sp_v3.0_unigene131120 SustainPine v3.0 645
AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.57e-31
Internal
sp_v3.0_unigene131378 SustainPine v3.0 336
AutoFact: putative receptor ser/thr protein [Oryza sativa Japonica Group] gb|ABF95119.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 7.691e-11
Internal
sp_v3.0_unigene131688 SustainPine v3.0 331
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 6.0e-30
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.492e-27
Internal
sp_v3.0_unigene131890 SustainPine v3.0 262
AutoFact: subtilisin-like serine protease 2 [Arabidopsis thaliana] emb|CAA17763.1| subtilisin proteinase-like [Arabidopsis thaliana] emb|CAB80215.1| subtilisin proteinase-like [Arabidopsis thaliana] gb|AAL67071.1| putative subtilisin serine protease [Arabidopsis th 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 0.0
Internal
sp_v3.0_unigene132335 SustainPine v3.0 364
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AH90_VITVI 6.0e-35
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene132546 SustainPine v3.0 348
AutoFact: glutamate receptor [Malus hupehensis] 3.0e-35
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 4.436e-19
Internal
sp_v3.0_unigene132548 SustainPine v3.0 656
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.606e-23
N-terminus
sp_v3.0_unigene132918 SustainPine v3.0 518
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 3.0e-23
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 1.007e-34
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain