Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene94167 SustainPine v3.0 690
• AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 0.0
• FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 9.07201e-42
Internal
sp_v3.0_unigene94435 SustainPine v3.0 586
• AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 9.933e-13
Putative C-terminus
sp_v3.0_unigene94581 SustainPine v3.0 850
• AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.337e-31
Internal
sp_v3.0_unigene94689 SustainPine v3.0 565
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat, putative 2.619e-14
Internal
sp_v3.0_unigene95339 SustainPine v3.0 573
• AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9SC16_RICCO 0.0
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 7.236e-12
Internal
sp_v3.0_unigene95386 SustainPine v3.0 528
• AutoFact: LRR receptor-like protein kinase (Fragment) n=3 Tax=Pseudotsuga RepID=C6F817_PSEMZ 0.0
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 3.34e-14
Internal
sp_v3.0_unigene95676 SustainPine v3.0 403
• AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 3.543e-38
C-terminus
sp_v3.0_unigene95977 SustainPine v3.0 501
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene96444 SustainPine v3.0 255
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene96471 SustainPine v3.0 330
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9RBM4_RICCO 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 6.311e-39
Internal
sp_v3.0_unigene96635 SustainPine v3.0 622
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1270; Flags: Precursor dbj|BAB02023.1| un 6.0e-21
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Os06g0199100 protein 5.848e-06
Internal
sp_v3.0_unigene96673 SustainPine v3.0 661
• AutoFact: putative protein kinase Xa21 [Oryza sativa Japonica Group] 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat, putative 5.953e-23
C-terminus
sp_v3.0_unigene96768 SustainPine v3.0 482
• AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9GU66_POPTR 0.0
• FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene96776 SustainPine v3.0 647
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 1.165e-14
Putative N-terminus
sp_v3.0_unigene97510 SustainPine v3.0 973
• AutoFact: Bacterial blight resistance protein XA26 n=7 Tax=Oryza sativa RepID=Q00KZ8_ORYSJ 0.0
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Leucine Rich Repeat, putative 2.494e-36
Putative C-terminus
sp_v3.0_unigene97530 SustainPine v3.0 762
• AutoFact: Leucine Rich Repeat, putative [Oryza sativa Japonica Group] gb|ABA91656.1| Leucine Rich Repeat family protein, expressed [Oryza sativa Japonica Group] gb|EAZ17602.1| hypothetical protein OsJ_33141 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 3.913e-20
Internal
sp_v3.0_unigene97768 SustainPine v3.0 208
• AutoFact: ABC transporter B family member 6 [Arabidopsis thaliana] sp|Q8LPT1.2|AB6B_ARATH RecName: Full=ABC transporter B family member 6; Short=ABC transporter ABCB.6; Short=AtABCB6; AltName: Full=Multidrug resistance protein 6; AltName: Full=P-glycoprotein 6 gb|A 7.0e-23
• FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 3.384e-06
Internal
sp_v3.0_unigene97932 SustainPine v3.0 559
• AutoFact: putative leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FII5.1|TDR_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase TDR; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM; AltName: Full=Tracheary elemen 6.0e-29
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 8.35e-29
C-terminus
sp_v3.0_unigene98363 SustainPine v3.0 201
• AutoFact: Os03g0773700 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0DN56_ORYSJ 5.0e-09
• FL-Next: sp=Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: CLV1-like receptor kinase 9.072e-11
Internal
sp_v3.0_unigene98773 SustainPine v3.0 602
• AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 3.00004e-41
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Putative receptor protein kinase 9.394e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain