Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene56866 SustainPine v3.0 420
• AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9RR97_RICCO 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xylem serine proteinase 1, putative 0.0
Internal
sp_v3.0_unigene56999 SustainPine v3.0 269
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 2.0e-28
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 7.247e-06
Internal
sp_v3.0_unigene57238 SustainPine v3.0 356
• AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 5.99756e-43
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 9.108e-30
Internal
sp_v3.0_unigene58326 SustainPine v3.0 345
• AutoFact: small GTP-binding protein [Mesembryanthemum crystallinum] 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein RHN1 1.309e-12
C-terminus
sp_v3.0_unigene58702 SustainPine v3.0 441
• AutoFact: ABC transporter B family member 20 [Arabidopsis thaliana] sp|Q9M3B9.1|AB20B_ARATH RecName: Full=ABC transporter B family member 20; Short=ABC transporter ABCB.20; Short=AtABCB20; AltName: Full=Multidrug resistance protein 14; AltName: Full=P-glycoprotein 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.669e-06
Internal
sp_v3.0_unigene58828 SustainPine v3.0 398
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SF98_RICCO 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 8.889e-12
Internal
sp_v3.0_unigene59187 SustainPine v3.0 383
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene59528 SustainPine v3.0 219
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene59888 SustainPine v3.0 336
• AutoFact: receptor protein kinase [Arabidopsis thaliana] 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene60730 SustainPine v3.0 401
• AutoFact: Unassigned protein
• FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61124 SustainPine v3.0 172
• AutoFact: glycolate oxidase [Solanum lycopersicum] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycolate oxidase 2.16e-26
Internal
sp_v3.0_unigene61284 SustainPine v3.0 241
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RI14_RICCO 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr12 scaffold_57, whole genome shotgun sequence 2.484e-07
Internal
sp_v3.0_unigene61559 SustainPine v3.0 274
• AutoFact: ABC transporter B family member 19 n=5 Tax=Camelineae RepID=AB19B_ARATH 2.0e-24
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene62233 SustainPine v3.0 314
• AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 4.74e-09
Putative N-terminus
sp_v3.0_unigene62645 SustainPine v3.0 162
• AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] dbj|BAD09807.1| putative receptor-like protein kinase [Oryza sativa Japonica Group] 2.0e-17
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 1.022e-09
Internal
sp_v3.0_unigene62833 SustainPine v3.0 166
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IN61_POPTR 4.0e-16
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene63936 SustainPine v3.0 164
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 2.552e-06
Putative C-terminus
sp_v3.0_unigene64050 SustainPine v3.0 195
• AutoFact: peptidase family-like protein [Oryza sativa Japonica Group] dbj|BAD32061.1| peptidase family-like protein [Oryza sativa Japonica Group] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene64091 SustainPine v3.0 328
• AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 3.0e-28
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.201e-22
Internal
sp_v3.0_unigene64393 SustainPine v3.0 152
• AutoFact: 4-coumarate:coenzyme A ligase 3 n=4 Tax=Funariaceae RepID=B7SBA1_PHYPA 3.0e-12
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 7.28675e-44
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain