Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene51528 SustainPine v3.0 694
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycolate oxidase 2.224e-33
C-terminus
sp_v3.0_unigene51578 SustainPine v3.0 234
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene51581 SustainPine v3.0 719
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein, putative 6.745e-11
Internal
sp_v3.0_unigene51944 SustainPine v3.0 212
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.393e-08
Putative N-terminus
sp_v3.0_unigene52179 SustainPine v3.0 390
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZU8_ORYSJ 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.033e-07
Putative N-terminus
sp_v3.0_unigene52388 SustainPine v3.0 440
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD87033.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] dbj|BAD87850.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] 5.0e-40
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: MDR-like ABC transporter 1.137e-08
Internal
sp_v3.0_unigene52981 SustainPine v3.0 394
AutoFact: Phosphopentothenoylcysteine decarboxylase, putative n=1 Tax=Ricinus communis RepID=B9RAN6_RICCO 3.0e-28
FL-Next: sp=Phosphopantothenoylcysteine decarboxylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphopantothenoylcysteine decarboxylase 6.471e-18
C-terminus
sp_v3.0_unigene53026 SustainPine v3.0 470
AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 6.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.153e-16
Internal
sp_v3.0_unigene53156 SustainPine v3.0 240
AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 2.0e-20
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene53668 SustainPine v3.0 370
AutoFact: putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] sp|Q9M0G7.1|PXL2_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM-LIKE 2; Flags: Precursor emb| 4.99983e-42
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 9.616e-38
Internal
sp_v3.0_unigene53760 SustainPine v3.0 453
AutoFact: Purine permease, putative n=1 Tax=Ricinus communis RepID=B9T6T6_RICCO 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleobase ascorbate transporter 5.453e-11
Internal
sp_v3.0_unigene53853 SustainPine v3.0 474
AutoFact: Cucumisin, putative n=1 Tax=Ricinus communis RepID=B9SC83_RICCO 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylem serine proteinase 1, putative 4.587e-40
Internal
sp_v3.0_unigene53908 SustainPine v3.0 183
AutoFact: pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene54159 SustainPine v3.0 358
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9TAC6_RICCO 4.0e-35
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 1.392e-18
Internal
sp_v3.0_unigene54545 SustainPine v3.0 384
AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
Sma3: Alanyl-tRNA synthetase 1.63e-10
Internal
sp_v3.0_unigene55165 SustainPine v3.0 413
AutoFact: MDR-like ABC transporter n=4 Tax=Poaceae RepID=Q8GU74_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene55795 SustainPine v3.0 158
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD87033.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] dbj|BAD87850.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] 6.0e-17
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: MDR-like ABC transporter 2.518e-09
Putative C-terminus
sp_v3.0_unigene56285 SustainPine v3.0 472
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD87033.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] dbj|BAD87850.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene56409 SustainPine v3.0 391
AutoFact: putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] sp|Q9ZUI0.1|Y2241_ARATH RecName: Full=Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130; Flags: Precursor gb|AAD03374.1| putative receptor- 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase-like protein 1.131e-25
Internal
sp_v3.0_unigene56494 SustainPine v3.0 399
AutoFact: RecName: Full=Glutamate receptor 2.5; AltName: Full=Ligand-gated ion channel 2.5; Flags: Precursor 1.0e-05
FL-Next: sp=Glutamate receptor 2.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 8.40779e-44
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain