Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene43622 SustainPine v3.0 812
AutoFact: Putative protein kinase [Oryza sativa] gb|AAM08708.1|AC116601_1 Putative protein kinase [Oryza sativa Japonica Group] gb|AAP51897.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group] gb|EAZ15139.1| hypothetical protein OsJ_30556 [Oryza sati 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene44678 SustainPine v3.0 496
AutoFact: clavata-like receptor [Picea glauca] 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 1.157e-29
C-terminus
sp_v3.0_unigene45106 SustainPine v3.0 222
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RI14_RICCO 1.0e-22
FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At1g56140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.659e-13
Internal
sp_v3.0_unigene45110 SustainPine v3.0 1124
AutoFact: putative leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FII5.1|TDR_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase TDR; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM; AltName: Full=Tracheary elemen 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.272e-37
C-terminus
sp_v3.0_unigene45536 SustainPine v3.0 357
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Flags: Precursor emb|CAC01881.1| putative protein [Arabidopsis thaliana] gb|AED9 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene46472 SustainPine v3.0 530
AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 0.0
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.766e-35
Internal
sp_v3.0_unigene47387 SustainPine v3.0 383
AutoFact: MDR-like ABC transporter n=4 Tax=Poaceae RepID=Q8GU74_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 4.576e-06
Internal
sp_v3.0_unigene47503 SustainPine v3.0 605
AutoFact: SHR5-receptor-like kinase [Saccharum hybrid cultivar SP70-1143] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 9.061e-15
Internal
sp_v3.0_unigene48400 SustainPine v3.0 180
AutoFact: ATP binding protein, putative (EC:2.7.11.25) 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_57, whole genome shotgun sequence 1.051e-09
Internal
sp_v3.0_unigene49115 SustainPine v3.0 262
AutoFact: ATP binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9SLN9_RICCO 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 9.894e-13
Internal
sp_v3.0_unigene49409 SustainPine v3.0 297
AutoFact: leucine-rich receptor-like protein kinase [Arabidopsis thaliana] gb|AAL32758.1| Unknown protein [Arabidopsis thaliana] gb|ACN59227.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEE28522.1| leucine-rich receptor-like protein 1.0e-16
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine Rich Repeat family protein, expressed 2.975e-06
Internal
sp_v3.0_unigene49753 SustainPine v3.0 942
AutoFact: Translation initiation factor IF-3 n=1 Tax=Ricinus communis RepID=B9T4Q8_RICCO 0.0
FL-Next: sp=Translation initiation factor IF-3, chloroplastic; Gracilaria tenuistipitata var. liui (Red alga). Plastid; Chloroplast. 0.0
Sma3: Translation initiation factor IF-3 4.214e-30
Putative Complete
sp_v3.0_unigene50303 SustainPine v3.0 879
AutoFact: kinase domain-containing protein [Arabidopsis thaliana] gb|AAL24403.1| Unknown protein [Arabidopsis thaliana] gb|AAN15471.1| Unknown protein [Arabidopsis thaliana] gb|AEE29481.1| kinase domain-containing protein [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 5.071e-11
C-terminus
sp_v3.0_unigene50627 SustainPine v3.0 419
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD87033.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] dbj|BAD87850.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein 1, 2, putative 2.49403e-41
Putative C-terminus
sp_v3.0_unigene50711 SustainPine v3.0 293
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene50788 SustainPine v3.0 177
AutoFact: Glutamate receptor n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8F0_PHYPA 1.0e-19
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.166e-19
Internal
sp_v3.0_unigene50994 SustainPine v3.0 415
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RIP1_RICCO 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 9.34e-14
C-terminus
sp_v3.0_unigene51361 SustainPine v3.0 399
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 5.00264e-43
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene51376 SustainPine v3.0 529
AutoFact: Polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q94LA8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.696e-20
Internal
sp_v3.0_unigene51480 SustainPine v3.0 572
AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9R6R5_RICCO 8.0e-31
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.34e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain