Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Glycoside hydrolase, family 5, conserved site

Term: IPR018087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene160797 SustainPine v3.0 225
AutoFact: Mannan endo-1,4-beta-mannosidase 1 n=3 Tax=Oryza sativa RepID=MAN1_ORYSJ 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,4-beta-D-mannan endohydrolase 1.431e-08
Internal
sp_v3.0_unigene160827 SustainPine v3.0 349
AutoFact: male sterility 2 (MS2) protein [Arabidopsis thaliana] prf||1916413A male sterility 2 gene 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene160831 SustainPine v3.0 258
AutoFact: Unassigned protein
FL-Next: sp=ABC transporter G family member 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: White-brown-complex ABC transporter family 3.176e-06
Internal
sp_v3.0_unigene160850 SustainPine v3.0 275
AutoFact: OSJNBa0019K04.23 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XTX5_ORYSJ 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 0.0
Internal
sp_v3.0_unigene161064 SustainPine v3.0 349
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161220 SustainPine v3.0 427
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161240 SustainPine v3.0 316
AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.71222e-43
Internal
sp_v3.0_unigene161356 SustainPine v3.0 441
AutoFact: Nckap1 domain containing protein 2.0e-26
FL-Next: Isoform 2 of Protein NAP1 OS=Arabidopsis thaliana GN=NAP1 0.0
Sma3: Nck-associated protein 1 1.103e-13
Internal
sp_v3.0_unigene161426 SustainPine v3.0 473
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R1D8_ORYSJ 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.4055e-42
Internal
sp_v3.0_unigene161482 SustainPine v3.0 204
AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 1.342e-18
Internal
sp_v3.0_unigene161732 SustainPine v3.0 331
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 1.0e-25
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.849e-07
Internal
sp_v3.0_unigene161937 SustainPine v3.0 372
AutoFact: rve domain containing protein 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161945 SustainPine v3.0 361
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RGY6_SELML 5.0e-35
FL-Next: sp=ABC transporter G family member 28; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: White-brown-complex ABC transporter family 1.592e-10
Internal
sp_v3.0_unigene162008 SustainPine v3.0 418
AutoFact: White-brown-complex ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HUH9_POPTR 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: White-brown-complex ABC transporter family 3.343e-20
Internal
sp_v3.0_unigene162100 SustainPine v3.0 464
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyprotein 9.686e-13
Putative C-terminus
sp_v3.0_unigene162164 SustainPine v3.0 313
AutoFact: mannan endo-1,4-beta-mannosidase 6 [Arabidopsis thaliana] sp|Q9LZV3.1|MAN6_ARATH RecName: Full=Mannan endo-1,4-beta-mannosidase 6; AltName: Full=Beta-mannanase 6; AltName: Full=Endo-beta-1,4-mannanase 6; Short=AtMAN6; Flags: Precursor emb|CAB82763.1| (1-4 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_61, whole genome shotgun sequence 4.95e-11
Internal
sp_v3.0_unigene163039 SustainPine v3.0 420
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 1.0e-35
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene163320 SustainPine v3.0 413
AutoFact: Ascorbate oxidase-like protein (Fragment) n=6 Tax=Picea RepID=E5FY33_PICAB 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: L-ascorbate oxidase 2.245e-27
C-terminus
sp_v3.0_unigene163577 SustainPine v3.0 96
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1X8_RICCO 4.0e-07
FL-Next: sp=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163656 SustainPine v3.0 334
AutoFact: Probable fatty acyl-CoA reductase 4 n=3 Tax=Arabidopsis RepID=FACR4_ARATH 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Male sterility protein, putative 2.029e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain