Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: U box domain

Term: IPR003613  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene156598 SustainPine v3.0 358
AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Oikopleura dioica RepID=E4YT26_OIKDI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene160538 SustainPine v3.0 431
AutoFact: Cation proton exchanger (Fragment) n=2 Tax=Populus trichocarpa RepID=B9HXD0_POPTR 0.0
FL-Next: sp=Cation/H(+) antiporter 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cation/H+ exchanger 1.125e-19
Internal
sp_v3.0_unigene161299 SustainPine v3.0 214
AutoFact: E3 ubiquitin-protein ligase PUB22 [Arabidopsis thaliana] sp|Q9SVC6.1|PUB22_ARATH RecName: Full=E3 ubiquitin-protein ligase PUB22; AltName: Full=Plant U-box protein 22; AltName: Full=U-box domain-containing protein 22 emb|CAB43434.1| putative protein [Arab 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_99, whole genome shotgun sequence 1.105e-08
N-terminus
sp_v3.0_unigene161822 SustainPine v3.0 442
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RJ04_RICCO 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene162055 SustainPine v3.0 377
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 2.283e-18
Internal
sp_v3.0_unigene162346 SustainPine v3.0 239
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RMH5_RICCO 1.0e-13
FL-Next: sp=U-box domain-containing protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene164382 SustainPine v3.0 180
AutoFact: Unassigned protein 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164778 SustainPine v3.0 255
AutoFact: similar to eukaryotic protein kinase domains (Pfam: pkinase.hmm, score: 171.43) [Arabidopsis thaliana] 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 6.864e-16
Internal
sp_v3.0_unigene165211 SustainPine v3.0 266
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 6.0e-08
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: E3 ubiquitin ligase 1.791e-15
Internal
sp_v3.0_unigene166654 SustainPine v3.0 365
AutoFact: Ubiquitin-protein ligase, PUB17 n=2 Tax=Selaginella moellendorffii RepID=D8RVS0_SELML 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167022 SustainPine v3.0 453
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167467 SustainPine v3.0 252
AutoFact: Unassigned protein 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167617 SustainPine v3.0 129
AutoFact: cation/H(+) antiporter 18 [Arabidopsis thaliana] gb|AED94697.1| cation/H(+) antiporter 18 [Arabidopsis thaliana] 3.0e-09
FL-Next: Isoform 2 of Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 0.0
Sma3: Cation/H+ exchanger 3.261e-07
Internal
sp_v3.0_unigene182978 SustainPine v3.0 793
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene183117 SustainPine v3.0 950
AutoFact: Phosphorylase-like protein protein [Arabidopsis thaliana] gb|AEE85565.1| Phosphorylase-like protein protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183186 SustainPine v3.0 660
AutoFact: Unassigned protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183215 SustainPine v3.0 864
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RHT2_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 6.991e-19
Putative C-terminus
sp_v3.0_unigene183247 SustainPine v3.0 607
AutoFact: Peptidyl-prolyl cis-trans isomerase-like 3 n=2 Tax=Dictyostelium RepID=PPIL3_DICDI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene183571 SustainPine v3.0 404
AutoFact: U-box domain-containing protein 13 [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thaliana] gb|AAK687 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183814 SustainPine v3.0 553
AutoFact: Unassigned protein
FL-Next: Isoform 2 of U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain